Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03924 ATGTTCAGAAACCAATACGACACCGACGTTACGACGTGGAGCCCCGCTGGGAGGCTCTTCCAGGTTGAATACGCAATGGAGGCAGTGAAGCAGGGTTCCGCCGCAATTGGCCTCCGATCCAAAACGCACGTCGTTTTAGCATGCGTCAACAAGGCCAACTCCGAGCTCTCTTCTCACCAGAAGAAGATCTTCAAAGTCGATGACCACATCGGCGTTGCCATCGCCGGACTCACTGCCGACGGCCGCGTTCTCTCGCGCTACATGCGCAACGAGTGCATCAACTATTCGTATACCTACGAGTCTCCTCTTCCCGTTGGACGACTCGTCGTTCAGCTCGCTGACAAGGCTCAGGTTTGCACCCAGCGGTCATGGAAGCGTCCTTATGGGGTTGGCCTCTTGGTCGGTGGACTGGATGAATCAGGAGCTCACCTCTATTATAACTGTCCAAGTGGAAACTATTTTGAATATCAGGCTTTTGCAATTGGTTCTCGCTCACAAGCCGCCAAGACATACTTGGAACGCAAGTTTGAGAACTTCATGAGCTCCTCACGCGAAGAACTGATTAAAGATGCACTTATTGCAACTAGAGAGTCTTTGCAAGGTGAAAAGCTCAGGAGCTCCGTATGCACTATTGCTGTGGTTGGAGTTGGTGAGCCGTTCCACATTTTGGATCAAGAGACTGTACAAAAGTTGATTGATGAATTTGAGATTGTCAGGGATGATGAACCTCCGGCTGAACCTCAGCCTGCAGCTGAGCAGGATGCTCCTGCAGATCAGGGTACCGGTGCTGATCAAGGTGCAGCCGCTGCAAGTCCAGATGTTGCTCCTATGGACATTTGA 840 0.5143 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRNECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERKFENFMSSSREELIKDALIATRESLQGEKLRSSVCTIAVVGVGEPFHILDQETVQKLIDEFEIVRDDEPPAEPQPAAEQDAPADQGTGADQGAAAASPDVAPMDI 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03924 279 MobiDBLite consensus disorder prediction 238 279 - -
Aip06g03924 279 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 1 269 - -
Aip06g03924 279 Pfam Proteasome subunit 29 214 IPR001353 GO:0005839|GO:0051603
Aip06g03924 279 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 232 IPR029055 -
Aip06g03924 279 PANTHER PROTEASOME SUBUNIT ALPHA TYPE 1 269 - -
Aip06g03924 279 SMART Proteasome_A_N_2 6 28 IPR000426 GO:0006511|GO:0019773
Aip06g03924 279 Pfam Proteasome subunit A N-terminal signature 6 28 IPR000426 GO:0006511|GO:0019773
Aip06g03924 279 ProSitePatterns Proteasome alpha-type subunits signature. 6 28 IPR000426 GO:0006511|GO:0019773
Aip06g03924 279 ProSiteProfiles Proteasome alpha-type subunit profile. 21 232 IPR023332 -
Aip06g03924 279 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 235 IPR029055 -
Aip06g03924 279 CDD proteasome_alpha_type_1 6 215 IPR035144 GO:0019773
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03924 Aip-Chr6 136886638 136889253 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03924 06 136886638 136889253 Aip06g03924 06 136886638 136889253 ECH