Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03915 ATGAGTTGGAGAACTCTATTCTCCAGACACAAAAAACTCACTCCATTCTTACAATTTTCCCAAAATGCCCCTATTCGCTCTTCAATATTCCATCCACTACCCTTTCCTCCCTCCACCGCCACCGCCACCTCCAGGAACTTTCACTCCTCCCGAGTCACCGCCCAACTCGGCGCCCAACTCGGTTCCCAGCTCAGAAACTCTCTCGTCCCTTCAGGCTCCATTGCCGACGAAGAAGACGCCGATGGAACCATGAACGAGTTCCTGTCCCGATTCGTGTGGATGATGCGGAAGAAGGTTCGGGAATCGTATCCTGATTCCGACAAGGGAACTGTCGACACCATGCTCCTCGTGATCGTCGAGCGCGTCGTTTCGGAGCTCGAGAAGGGAGGGTTCGATGGCGTCCTTGGGGCGGCGACGGCGACGTTTCGTCCCGGTGACAACGGCGATTTCAGCGAGGATTTGTGGAGGACCGTGTGGGAAGTGAGCAACAATGTGATCGAAGGAATGAATAAGGAGAGGAAGAAGGAGAAGATGAAAGGTTTCTTGCAGTGTGATGAGGTGAAGCAGATGTGCAGGTTTGCTGGCGAGGTTGGAATACGAGGGGACTTGCTTAGGGAGCTGAGGTTCAAGTGGGCACGTGAGAAGATGGAGGAGCATGAATTCTACGAGGGTTTGGAGCGCATGAGGAAAGAAGCCGAAGCTGAAGAACATGAAGAGGAGGAACAAGGGGGTACAGAACATGGGGATGCTGGTGTTGGTGTTGCTGAGGAAGGGGGTACGGTTGTTGGACTTCCCAAGAGGAAGGGGAAGATAAGGTACAAGATTTATGGGCTCGATTTATCTGATCCAAAGTGGGCACATGTGGCTGATAGGATCCATGAGGCAGGAGAGGTCATGTGGCCAAAGGAGGCAAAGCCAATAAATGGGAAATCCAAGATTGTTACCGAGAATATTCTGAAGTTAAAGGAGGAGGAGGGCAGTGATGAGTTGTTGAGGCTGTTAGCCGAGTGGGTGGAGCTCTTGCAACCCAGTAGGGTTGATTGGAAGAGCCTGCTTGACGGATTGAAACAGCAGAATCCACCCTTGTACTACAAGGTGGCGGAAATTGTGTTGACTGAAGATTCTTTCCAAACAACTATATCTGACTACTGTAGGCTTATTGATGCCTATGCTAAAGAGAATCGGTTTGAAGATGTTGAGAGGATGGTAAAGAAGATGAACGAAAAAGGTATGGTACCAGATGCCTCAGCAGCAACCGAATTGCTCCACATGTACTGCAAGGCGGGAAATCTTGAGCGCGCAAAACAAGCATTTGAAATCTTGAAGGCCCAAGGCTTCCAGCCAAACGTAAAAGTCTACACCGCACTGATCATGGCCTATGTAAATTCCAACGATCCTGCAAAGGGTGAATATCTTCTTAGAGAGATGGATACAAAAGATGTTAAACCAACTAAGGAAATATACATGGCACTGCTGCGAGCATTTTCTAAACGCGGTGAAGTTACTGGAGCTGAACGGATTTCTACAATGATGCAGTTTGCAGGATTCCAGCAGACTAAGGAGACATGCACATTACTTGTTGAGGCACATGCAAATGCAGGTAACCCGGATGCGGCTAGAAGGAACTTTGATTACATGAAAAACTTGGGGCATAAGCCTGATGATAGGTGCACTGCTAGCATGATTGTGGCTTATGAGAAGAAAAACTTATTGGACAAGGCATTAGAACTTCTTTTGAAGCTCGAGAAGGATGGGTTTGTGCCTGGGGTTGCAACTTACTCTGTTCTGGTAGATTGGATGAGTAGGTTGCTGCTCGTTGATGAGGCCGAACATCTTTTAGACAAAATTGCTCAGCAAGGTGAGGCTCCTCCGTTTAAGGTTCAAGTGAGTCTCTGTGATATGTATGCGAGGGCAGGAAATGAGAAAAAGGCCCTTCAAGCTCTTGGTGCTGTGGAAGCTAGGAAGGATGAATTGGAACATGCTGATTTCGAGAGAATAATCCAGAGCCTTCTTGCTGGCGGGTTTGAGCAGGATGCGCGAAGAATGTGTGGCATCATGGAGGCGCAGGGTTTCGCTCTATCGGAATCCCTTCAGATGGCCCTTTTGAAACCTAGCCGCAAATTCCCAAAGTTTAGATAG 2139 0.4862 MSWRTLFSRHKKLTPFLQFSQNAPIRSSIFHPLPFPPSTATATSRNFHSSRVTAQLGAQLGSQLRNSLVPSGSIADEEDADGTMNEFLSRFVWMMRKKVRESYPDSDKGTVDTMLLVIVERVVSELEKGGFDGVLGAATATFRPGDNGDFSEDLWRTVWEVSNNVIEGMNKERKKEKMKGFLQCDEVKQMCRFAGEVGIRGDLLRELRFKWAREKMEEHEFYEGLERMRKEAEAEEHEEEEQGGTEHGDAGVGVAEEGGTVVGLPKRKGKIRYKIYGLDLSDPKWAHVADRIHEAGEVMWPKEAKPINGKSKIVTENILKLKEEEGSDELLRLLAEWVELLQPSRVDWKSLLDGLKQQNPPLYYKVAEIVLTEDSFQTTISDYCRLIDAYAKENRFEDVERMVKKMNEKGMVPDASAATELLHMYCKAGNLERAKQAFEILKAQGFQPNVKVYTALIMAYVNSNDPAKGEYLLREMDTKDVKPTKEIYMALLRAFSKRGEVTGAERISTMMQFAGFQQTKETCTLLVEAHANAGNPDAARRNFDYMKNLGHKPDDRCTASMIVAYEKKNLLDKALELLLKLEKDGFVPGVATYSVLVDWMSRLLLVDEAEHLLDKIAQQGEAPPFKVQVSLCDMYARAGNEKKALQALGAVEARKDELEHADFERIIQSLLAGGFEQDARRMCGIMEAQGFALSESLQMALLKPSRKFPKFR 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03915 712 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 519 553 IPR002885 -
Aip06g03915 712 Pfam Pentacotripeptide-repeat region of PRORP 431 537 IPR033443 -
Aip06g03915 712 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 414 448 IPR002885 -
Aip06g03915 712 Coils Coil 222 242 - -
Aip06g03915 712 PANTHER OS07G0661900 PROTEIN 23 701 IPR044657 -
Aip06g03915 712 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 554 588 IPR002885 -
Aip06g03915 712 TIGRFAM PPR: pentatricopeptide repeat domain 522 554 IPR002885 -
Aip06g03915 712 TIGRFAM PPR: pentatricopeptide repeat domain 421 450 IPR002885 -
Aip06g03915 712 TIGRFAM PPR: pentatricopeptide repeat domain 383 415 IPR002885 -
Aip06g03915 712 TIGRFAM PPR: pentatricopeptide repeat domain 452 484 IPR002885 -
Aip06g03915 712 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 449 483 IPR002885 -
Aip06g03915 712 Pfam PPR repeat 383 410 IPR002885 -
Aip06g03915 712 Pfam PPR repeat 560 586 IPR002885 -
Aip06g03915 712 Pfam PPR repeat 592 619 IPR002885 -
Aip06g03915 712 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 5, MITOCHONDRIAL 23 701 - -
Aip06g03915 712 MobiDBLite consensus disorder prediction 229 246 - -
Aip06g03915 712 MobiDBLite consensus disorder prediction 229 253 - -
Aip06g03915 712 Gene3D Tetratricopeptide repeat domain 511 707 IPR011990 GO:0005515
Aip06g03915 712 Gene3D Tetratricopeptide repeat domain 325 462 IPR011990 GO:0005515
Aip06g03915 712 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 379 413 IPR002885 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03915 06 136837052 136840191 Aip06g03915 06 136837052 136840191 ECH