Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03907 ATGGCCATTGCAAAGTTGGTTAGGAAAGTGAAACGCCCATATGGGTTATGGGTGAAGATGACAGCTGTGACAATGTTGGGTTTGTGCTTCATCTTTGTGTGGGGGGTGTTCTCGAATTCGTCTTCGTCTATTACCACACAAAGGGAAAGCTTTGAAGACATTATAGAACCTTCTTCCTCCTCTTCTACTTCTTCTAAAGGGGTTCAAACACAAACACAACTACCACACAAGAAGGAGGAGACTAAGGCAGAGGAAAAGCAAAATTTTGGTGGCGTGTCGAATAAGGAGAAGGATGTGTTGGGGGAGGATGAGAAGAATGGTAATAGTTCTGCCACCGTACATCAGGAACATGACAAAGGGGTGGCACCACATAAAAGGGTGCATAAGAACGATAAAGATAAATATAAAGTGAGAGCAAATGAAGTGTCTGAATCTGATGGTAATGATGAATCAGAGGATAAGGAAGAGAAAGAGGAGAGTGAAGGAGAGTTGGAAGGTGAAAAAGAAGGGTCTGATCGTGACGGTGAAGTGGGTGTGGATTTTGAAATGGATGATGGTGGTGACAGTGGTTTAGCTGAATCTTTGGATCAGGATTCTAAACTGTTTGAAGATGGAGGTGTGGGAACAAGCAAGGGACAATTTAAAGGGCCATTGTTTGATCCAAATGCTAGCTATAAGTGGAAATTGTGTAGTACTCGGAGCAAGCATAACTATATTCCTTGTATTGATATTGAAGTTGGTGGTGGGAAGGTTCAGAGTTACCGTCATACTGAGAGGAGTTGTCCAAGGGCGCCAGTAATGTGTTTGGTTCCTCTTCCTCATGGTGGATACGGGTATTCGCAACCATGGCCTGAGAGCAAATCAAAGATATTGTTTAAGAATGTTGCACACCCGAGACTTGCTGCTTACATGAAGAAGCATAGTTGGTTGGTGGAGTCCGGCGAGTATCTTACTTTTCCACAAAACCAGTCTGAGTTCAAAGGTGGGATTCAGCACTATCTTGAGTCAATTGAAGAGATGGTACCAGACATCGAGTGGGGAAAAACTATTCGTGTTGTCCTTGAAATTGGGTGTTCAGATTCGAGCTTCGTGGTTGCACTTCTTGATAAAGATGTTTTAACATTGACCCTAGGCTTGAAGCATGATCTAGTGGACTTAGCTCAGGTGGCACTCGAGCGTGGCTTTCCGGCAGTAGTTAGCCCTTTTGGTAGAAGAAGGCTTCCTTTTCCAAGTCAAGCTTTTGATGCTATTCATTGTGGGGGTTGCAGCATCCCTTGGCATTCGAATGGTGGTAAGCTTCTGTTCGAGATGAATCGGATTCTAAGACCCAGTGGATACTTTATTATGTCGACTAAACATGACAGCATTGAAGAAGAAGAAGGTTGGTCAATCAAAGGGTATAAAATTATTGGTTCACATAGCGGTGTTAAGATTTGTAGATGGACCAAGTCACAGCTTCGAGGACGGGGTGGTTGCTATAAGCATTCATTCTATGGTATTGAGAGCCATAGGTGCATGGAGGCAACCCCTAGCCTGGCCTGTGCAAATAAATGTGTTTTTTGTTGGAGACATCACACAAATCCGGTGGGAAAAAGTTGGCAATGGAAGATGGATGATCCAATAGAGATTGTAAATTCTGCAATAGAGATGCATTCAAATATGATTAAACAAATTAAAGGAGTTCCTGGAGTTACCCTGGAGCGACTAAACGAAGGTCTTACACCACGACATTGTGCACTATCTCTTGTTGGGGAACCTATTATGTATCCAGAGATAAATACACTTGTGGATGAACTGCACAAAAGGAGAATTTCCACTTTTCTGGCGACAAATGCACAGTTTCCAGATAAAATAAAGTCAATGAAGCCTCTCACCCAGTTATATGTCAGTGTAGATGCTGCAACAAAAGACTCCTTGAAGGCAATTGATAGGCCACTCTTTGGAGATTTCTGGGAACGATTCATTGATTCCTTGACAGCCCTGAAGGAAAAACATCAAAGAACTGTATACCGCTTGACATTGGTAAAAGGTTGGAACACTGAAGATGTTGATGCTTATTACAAGCTCTTTAGTATTGGAGAACCTGACTTTGTTGAAATCAAGGGAGTTACATATTGTGGCTCATATGCTTCTTCCTTCTCTTCTGTGCACCCTCTTTGCTCAAGATATCTTCTCGTGTGTCAAAAGCACCATTCAGTGACAATTATCTCTTGA 2214 0.4255 MAIAKLVRKVKRPYGLWVKMTAVTMLGLCFIFVWGVFSNSSSSITTQRESFEDIIEPSSSSSTSSKGVQTQTQLPHKKEETKAEEKQNFGGVSNKEKDVLGEDEKNGNSSATVHQEHDKGVAPHKRVHKNDKDKYKVRANEVSESDGNDESEDKEEKEESEGELEGEKEGSDRDGEVGVDFEMDDGGDSGLAESLDQDSKLFEDGGVGTSKGQFKGPLFDPNASYKWKLCSTRSKHNYIPCIDIEVGGGKVQSYRHTERSCPRAPVMCLVPLPHGGYGYSQPWPESKSKILFKNVAHPRLAAYMKKHSWLVESGEYLTFPQNQSEFKGGIQHYLESIEEMVPDIEWGKTIRVVLEIGCSDSSFVVALLDKDVLTLTLGLKHDLVDLAQVALERGFPAVVSPFGRRRLPFPSQAFDAIHCGGCSIPWHSNGGKLLFEMNRILRPSGYFIMSTKHDSIEEEEGWSIKGYKIIGSHSGVKICRWTKSQLRGRGGCYKHSFYGIESHRCMEATPSLACANKCVFCWRHHTNPVGKSWQWKMDDPIEIVNSAIEMHSNMIKQIKGVPGVTLERLNEGLTPRHCALSLVGEPIMYPEINTLVDELHKRRISTFLATNAQFPDKIKSMKPLTQLYVSVDAATKDSLKAIDRPLFGDFWERFIDSLTALKEKHQRTVYRLTLVKGWNTEDVDAYYKLFSIGEPDFVEIKGVTYCGSYASSFSSVHPLCSRYLLVCQKHHSVTIIS 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03907 737 MobiDBLite consensus disorder prediction 146 163 - -
Aip06g03907 737 MobiDBLite consensus disorder prediction 53 72 - -
Aip06g03907 737 CDD Radical_SAM 510 724 - -
Aip06g03907 737 Pfam Radical SAM superfamily 510 689 IPR007197 GO:0003824|GO:0051536
Aip06g03907 737 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 237 461 IPR004159 GO:0008168
Aip06g03907 737 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 320 470 IPR029063 -
Aip06g03907 737 SFLD Radical SAM 461 710 IPR007197 GO:0003824|GO:0051536
Aip06g03907 737 MobiDBLite consensus disorder prediction 73 145 - -
Aip06g03907 737 MobiDBLite consensus disorder prediction 53 194 - -
Aip06g03907 737 ProSiteProfiles Radical SAM core domain profile. 498 737 IPR007197 GO:0003824|GO:0051536
Aip06g03907 737 SUPERFAMILY Radical SAM enzymes 511 691 - -
Aip06g03907 737 CDD AdoMet_MTases 353 450 - -
Aip06g03907 737 Gene3D Aldolase class I 440 722 IPR013785 -
Aip06g03907 737 Pfam Wyosine base formation 693 709 IPR013917 -
Aip06g03907 737 SFLD tRNA wybutosine-synthesizing 461 710 IPR034556 GO:0008033|GO:0051539
Aip06g03907 737 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 8 463 IPR004159 GO:0008168
Aip06g03907 737 PANTHER METHYLTRANSFERASE PMT28-RELATED 8 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03907 Aip-Chr6 136773871 136777969 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03907 06 136773871 136777969 Aip06g03907 06 136773871 136777969 ECH