Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03900 ATGGCAACGAAGCTTGATCCATTTACTCTCCTTCTTTCTCTCTTCTTTGCATTCAACCTCGCAAGTGGTGAATCATTCATAGGGGTTAACTATGGACAGGTGGCTGATAACCTTCCACCGCCGTCAACCACCGCCAAGCTGCTCCAATCCACCGCCATCGGAAAAGTTCGCTTGTACGGTTCCGACCCTGCTATTATCAAAGCACTCGCCAACACTGGAATTGGAATCGTAATTGGAGCAGCAAATGGGGATATTCCATCACTTGCATCGGATCCAAACTATGCCAAAAACTGGGTGAGCTCCAACGTTGTACCTTTCTACCCAGCCAGCAACATCATCCTCATAACCGTTGGTAACGAGATTATAACCTCAAACGATCCAAATCTCATGAACCAGATGCTCCCCGCCATTCAAAATGTCCAAAATGCCCTTAATGCCGCCAATTTAGGAGGCAAGATTAAGGTGTCAACGGTTCATTCAATGGCGGTCTTGAAGGACTCGGAGCCACCGTCTGCCGGGAGGTTCCACCCGGAATACTCCACCGTTTTACAAGGATTGTTGTCGTTTAACAATGCGACGGGGTCGCCGTTTGCCATCAACCCTTACCCTTATTTTGCTTATAGAGATGATCCTGGGAGGCAAGATAACTTGGCCTTTTGCCTCTTTCAACCCAATGCTGGAAGACTTGATCCCAACACCAATATCAAATACATGAACATGTTTGATGCTCAGGTTGATGCTGTCCGCTCTGCATTGAACTCAATGGGGTTTAAGGATGTTGAGATCGTGGTTGCGGAGACAGGTTGGCCATACAAAGGAGACAGCAGTGAGGTTGGTCCGAGTCTTGAAAACGCCAAGGCTTACAACGGTAACCTCATCGCGCACCTTAGATCCATGGTTGGGACACCATTGATGCCAGGGAAATCGGTTGACACTTACATCTTCGCATTGTATGATGAGGATTTGAAGCCAGGACCAACTTCTGAGAGATCTTTTGGTCTATTCAACCCTGATCAATCCATGATCTATGATGCTGGTCTCTCCAAACAGCAGACACAACAGAATAGCACAAGCCCTGTTGTAGCACCGAGTCCGGATGTGTCAAAATCTCCGATGACACCGGATGTACCGAACTCAAACCCTCCGTCGACACCGGCCGTGTCGTCAAACCCTCCGGTGACTCCAGCATCAACAGGGCCAAGTCCAACTCGAAACAAAGCACAATTCTCAAATGGCCATGAAGCCATTTTTTTGCAACCTTTAATGATCACACTCTCTACAGTTCTCACCTTAATGTTACTCTAG 1305 0.4774 MATKLDPFTLLLSLFFAFNLASGESFIGVNYGQVADNLPPPSTTAKLLQSTAIGKVRLYGSDPAIIKALANTGIGIVIGAANGDIPSLASDPNYAKNWVSSNVVPFYPASNIILITVGNEIITSNDPNLMNQMLPAIQNVQNALNAANLGGKIKVSTVHSMAVLKDSEPPSAGRFHPEYSTVLQGLLSFNNATGSPFAINPYPYFAYRDDPGRQDNLAFCLFQPNAGRLDPNTNIKYMNMFDAQVDAVRSALNSMGFKDVEIVVAETGWPYKGDSSEVGPSLENAKAYNGNLIAHLRSMVGTPLMPGKSVDTYIFALYDEDLKPGPTSERSFGLFNPDQSMIYDAGLSKQQTQQNSTSPVVAPSPDVSKSPMTPDVPNSNPPSTPAVSSNPPVTPASTGPSPTRNKAQFSNGHEAIFLQPLMITLSTVLTLMLL 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03900 434 Pfam Glycosyl hydrolases family 17 27 344 IPR000490 GO:0004553|GO:0005975
Aip06g03900 434 MobiDBLite consensus disorder prediction 375 389 - -
Aip06g03900 434 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 10 361 IPR044965 GO:0004553|GO:0005975
Aip06g03900 434 MobiDBLite consensus disorder prediction 390 408 - -
Aip06g03900 434 MobiDBLite consensus disorder prediction 348 408 - -
Aip06g03900 434 MobiDBLite consensus disorder prediction 348 364 - -
Aip06g03900 434 SUPERFAMILY (Trans)glycosidases 27 345 IPR017853 -
Aip06g03900 434 Gene3D Glycosidases 26 356 - -
Aip06g03900 434 PANTHER GLYCOSYL HYDROLASE FAMILY 17 PROTEIN 10 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03900 Aip-Chr6 136731645 136736488 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03900 06 136731645 136736488 Aip06g03900 06 136731645 136736488 ECH