Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03893 ATGGCGGGTCGAAGAGACGCGTTGCTGAGCAAAGACAAAGCCCACTCCTCCCTCTTCTTCAGATCTCCGATCGCCGCCGCCGTCCTCGTCGGCGTTATCGTCGGCTGCGTCTTCGCATTCCTCTTTCCCCATGGCCTCTTCTTCGGTCCTCATCATCGCAAACTCAAAACTCGAATTTCACATCCTCAGATGGTTTCATCTGTCGCGTGTGTATTGCCGGAACAAGTTAATGCGCTGAAAACCGATATTCTGGCAGCGAGGGAGAAGAATTCTGAGCTCAAGAAACAGGTCAGGAGTCTAATGGAGAAGCTGCGGATGGCGGAGCAAGGAAAGGGTCATGCACTGGAGCAGGTTGTTGTGCTGGGTGAGAAGCACAAGGCTGGGCCTTTTGGCACTGTCAAGGGTCTCAGGACTAATCCAACCGTGGCTCCGGACGAATCCGTGAATCCAAGATTGGCAAAGATCTTGAAGGATGTTGCTATTTATAAAGAACTTATAGTTTGCCTTGCAACCTACAATGTGAAGGAAATGTTGGAGCTCTGGTTTACCAACATCAAGAAGGTTGGCATACCTAATTACTTAGTAGTTGCCTTAGACAGCGAAACCGAAGAATTCTGCAAATTGAATGATGTTCCGGTATATAGAAGAGATCCGGATAAATATGTTGATTCAGTCGCCAAGGCTGGTAATAACCATGCTGTCTCTGGATTGAAATTTCGTATTCTAAGAGAATTTTTGCAGCTGGGTTATGGTGTTATTCTCTCGGATGTTGATATTGTATACTTGCAGAACCCATTTGATCATCTTTATAGAGATTCAGATGTGGAATCAATGTCTGATGGCCACAATAACATGACAGCCTACGGTTATAATGATGTCTTCGATGAACCTTCAATGGGTTGGGCGAGGTATGCTCATACGATGAGAATATGGGTTTACAACTCTGGTTTCTTTTACATAAGGCCTACTATTCCATCAATCGAGCTCCTAGATCGTGTCGCTACCCGGCTTTCCCTGGATCCAAAAGCATGGGACCAGGCCGTTTTCAACGAAGAGCTCTTTTTCCCTTCGCATCCTGGTTATGATGGAGTTTATGCAGCCAAGAGAACAATGGATATGTACCTTTTTATGAACAGCAAGGTTCTGTTCAAGACAGTTAGGAAAAGCAATCCACTTAAGAAGTTGAAGCCGGTGATTGTACATATTAACTACCATCCTGATAAATTCGAAAGAATGAAGGCAGTGGTTGATTTCTATGTCAATGGAAAACAAGATGCGCTGGATAATTTCCCAGATGGTTCTGAGTGTATACAAGCTACTCAAGCTCTCTGCATTTGTCCAACGAGGGAGCTTGCTATTCAGAACACTGAAGTTCTCCGGAAGATGGGGAAGCACACAGGGATTAGCTCGCACTGTGCCGTTCCGACAGATAGCAGGGATTCAATTCAAATTCAAAAACGGGAGAAAATTAAGGCTCAGGTGGTTATTGGGACTCCTGGCACCATCAAGAAGTGGATTTCTTTCAAGAAATTGGAGGTGACCAAATTGACGATTCTTGTCTTTGATGAGGCTGATCAAATGCTTGCTGAGGATGGTTTTAAGGATGATTCCTTGAGGATAATGAAAGAAATAGAAAAATTCAATTCTAGCTGCCAGGTTCTTCTATTTTCTGCCACATTCAATGACATTGTCAAGAACTTTGTTGAGAGGACAGTTAAAAAGGACCATAATAAACTTTTTGTTAAGAAAGAAGAGCTTTCTTTAGCTGCTGTGAGGCAGTTTAAAGTGCACTGCCCCAATGAGTTGTCGAAGATTGAGGTGATAAAAGATTACATATTCGAATTAGGAGAAAATGTGGGCCAAACCATCATATTCGTGCGCACGAGACAGAGTGCAAAAATGCTGCACAAGTCACTTGTCGAAATGGGCTATTTGGTTACTTCGATACAAGGTGCTCTTGACCATGAAGAGAGAGACAAAATTGTCAAAGAGTTCAGAGATGGTTTGACTCAAGTTCTTATATCCACGGATGTTCTTGCTCGAGGCTTTGATCAGCAACAGGTCAATTTGGTTATCAACTATGATCTCCCAATAAAACATACTGCGGAGTATACACGGGAATTTGAGCCTGATTATGAGGTGTACTTGCACAGAGTTGGTAGGGCTGGTCGATTTGGCCGCAAGGGGGCTGTGTTTAACCTAATATATGATGAAAAAGATGAAAGGCTGATGTCAAAGATCGAGAACCATTTTGGCACCCGTGTATCAGAGGTACGAGAAAAAAGTGTTGAAGACTATAAAGCTGCACTCAAAGAAGCCGGTTTACTACaagcatag 2337 0.4343 MAGRRDALLSKDKAHSSLFFRSPIAAAVLVGVIVGCVFAFLFPHGLFFGPHHRKLKTRISHPQMVSSVACVLPEQVNALKTDILAAREKNSELKKQVRSLMEKLRMAEQGKGHALEQVVVLGEKHKAGPFGTVKGLRTNPTVAPDESVNPRLAKILKDVAIYKELIVCLATYNVKEMLELWFTNIKKVGIPNYLVVALDSETEEFCKLNDVPVYRRDPDKYVDSVAKAGNNHAVSGLKFRILREFLQLGYGVILSDVDIVYLQNPFDHLYRDSDVESMSDGHNNMTAYGYNDVFDEPSMGWARYAHTMRIWVYNSGFFYIRPTIPSIELLDRVATRLSLDPKAWDQAVFNEELFFPSHPGYDGVYAAKRTMDMYLFMNSKVLFKTVRKSNPLKKLKPVIVHINYHPDKFERMKAVVDFYVNGKQDALDNFPDGSECIQATQALCICPTRELAIQNTEVLRKMGKHTGISSHCAVPTDSRDSIQIQKREKIKAQVVIGTPGTIKKWISFKKLEVTKLTILVFDEADQMLAEDGFKDDSLRIMKEIEKFNSSCQVLLFSATFNDIVKNFVERTVKKDHNKLFVKKEELSLAAVRQFKVHCPNELSKIEVIKDYIFELGENVGQTIIFVRTRQSAKMLHKSLVEMGYLVTSIQGALDHEERDKIVKEFRDGLTQVLISTDVLARGFDQQQVNLVINYDLPIKHTAEYTREFEPDYEVYLHRVGRAGRFGRKGAVFNLIYDEKDERLMSKIENHFGTRVSEVREKSVEDYKAALKEAGLLQA 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03893 778 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 441 578 IPR014001 -
Aip06g03893 778 Pfam Nucleotide-diphospho-sugar transferase 190 412 IPR005069 -
Aip06g03893 778 Gene3D - 590 770 IPR027417 -
Aip06g03893 778 CDD SF2_C_DEAD 591 735 - -
Aip06g03893 778 SMART ultradead3 337 594 IPR014001 -
Aip06g03893 778 Pfam DEAD/DEAH box helicase 438 566 IPR011545 GO:0003676|GO:0005524
Aip06g03893 778 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 607 767 IPR001650 -
Aip06g03893 778 Pfam Helicase conserved C-terminal domain 604 726 IPR001650 -
Aip06g03893 778 SUPERFAMILY Nucleotide-diphospho-sugar transferases 166 377 IPR029044 -
Aip06g03893 778 SMART helicmild6 633 726 IPR001650 -
Aip06g03893 778 PANTHER ARABINOSYLTRANSFERASE RRA3 1 435 IPR044290 GO:0016757|GO:0080147
Aip06g03893 778 PANTHER GLYCOSYLTRANSFERASE 1 435 - -
Aip06g03893 778 Gene3D - 434 589 IPR027417 -
Aip06g03893 778 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 440 744 IPR027417 -
Aip06g03893 778 Coils Coil 76 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03893 Aip-Chr6 136658049 136666784 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03893 06 136658049 136666784 Aip06g03893 06 136658049 136666784 ECH