Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03888 ATGTTTCCGTGTAGCTCACGCGCTTTGTTTTCTAGGTCTCGCTGTGTGCTTCGATTCGACGTCGTCGTTCTCGCTATTGTATTGATATTGTTTTGGTTGGAAGCTGGTACTGCAAAACCTGTAGAGCACCGACTTCAGTGGGGAAGCTCAGAAGAGAGGACTGGGAATGTTGCCTCGCACTCTTGCATACACGACCAGATAATTGAACAAAGAAAGCGACCTGGTCGCAAGGTGTATTCGGTAACCCCACAGGTGTACGAGCCTGGTGTCTTGAAACCCCTTCAGCACAGAGGCAGGGCATTGCTTGGTGTATCATCATCAGTGGAATCTCAAAAGGATGCAAAACAACCTATAAGGATTTATCTAAATTATGACGCTGTGGGCCACTCGTCTGACAGGGATTGTCGGAAAGTTGGTGATATTGTTAAACTTGGGGAGCCTCCTTTGGCTTCGCTGCTAGGTTCGCCTTTGTGTAATCCTCATGCTGATCCTCCAATCCTTGGTGATTGTTGGCATAACTGCACTTCTGAAGATATCTCTGGAGAGGACAAAAAGCATCGACTTCGTAAGGCATTAGGGCAGACAGCTGACTGGTTTAGGAGAGCATTGGCTGTTGAGCCAGTCAAGGGGAACTTGCGATTAAGTGGATATTCTGCATGTGGACAAGATGGAGGTGTGCAGCTTCCACGTGAATATATCGAGGAGGGTGTCTCCAATGCCGACTTAGTTCTTTTGGTGACTACGAGACCCACAACTGGGAATACACTTGCTTGGGCAGTTGCATGTGAACGGGATCAATGGGGACGTGCTATAGCTGGACATGTTAACGTTGCTCCTCGTCATTTGACAGCTGAGGCAGAGACTTTGCTTTCTGCTACTCTGATACACGAGGTTATGCATGTTCTTGGTTTTGATCCCCATGCCTTTGCTCATTTTAGAGATGAAAGGAAAAGACGCCGTAGTCAGGTTACTGAACAAATTATGGATGAAAAGATTGGGCGGATGGTAACACGTGTGGTTCTTCCACGTGTTGTCATGCATTCACGACATCATTATGGGGCATTCTCAGGAAATTTTACTGGTTTAGAGCTGGAAGATGGTGGAGGACGTGGCACATCAGGGTCTCATTGGGAGAAGAGGCTACTAATGAATGAGATTATGACTGGTTCTGTTGACACAAGATCTGTAGTTTCTAAAATGACATTGGCTCTCTTGGAAGATAGCGGATGGTATAAAGCTAATTATAGCATGGCTGACCGGCTTGATTGGGGTCGCAACCAAGGTAGCGAATTTGTTACCTCCCCTTGCAATCTTTGGAAGGGGGCCTATCGTTGCAACACAACACAGTTCTCAGGTTGTACATATAACAGAGAGGCAGAAGGTTACTGCCCGATTCTAACATATAGTGGAGATCTCCCTCTGTGGGCTCAGTATTTTCCACAAGCTAATAAAGGCGGCCAATCCTCATTAGCCGATTATTGCACTTATTTTGTTGCATACTCTGATGGATCATGTACAGACACTAACAGTGCTCGTGCACCTGATAGAATGCTTGGTGAAGTCCGAGGAAGTAACTCTAGGTGTATGGCCTCATCATTAGTGCGCACAGGATTTGTACGGGGTTCTACGACCCAGGGAAACGGTTGTTATCAGCACAGGTGTATTAATAATTCTTTGGAGGTTGCTGTTGATGGTATCTGGAAAGTGTGTCCTCGGGCTGGTGGACCCATTCAGTTTCCTGGCTTTAATGGTGAATTAATCTGCCCTGCATACCATGAGCTCTGTAACACAGCCCCAGTGGCTGTGTCTGGGCAATGTCCTAATGCGTGTAACTTCAATGGAGATTGTGTTGAAGGACGCTGCAATTGCTTTCTTGGATTTCATGGTCATGATTGCAGTAAACATTCCTGCCCGAGCAACTGCAATGGCAATGGCATCTGTCTCTCAAACGGAATTTGTGAATGTAAAGCTGGCTACACTGGCATTGACTGTTCCACCGCGGTTTGTGATGAGCAATGCAGCCTTCATGGTGGGGTTTGTGATAATGGAGTTTGTGAGTTCCGATGTTCGGACTATGCGGGATATACTTGCCAGAACAGCTCAATGCTCCTCTCCAGCCTTTCAGTTTGCAAGGAAGTGCTGGGAAAGGGTATTTCTGGGCAGCATTGTGCACCTAGTGAACCTAGTATTCTGCAGCAGCTAGAAGAAGTGGTTGTCATGCCCAACTACCACCGACTATTTCCTGGTGGTGCAAGGAAATTATTTAATATATTTGGGAGTTCCTACTGTGACGAGGCGGCTAAACGACTTGCATGCTGGATTTCCATCCAAAAGTGCGACGGTGATGGAGACAACAGGCTTCGAGTATGTCATTCTGCATGCCAGTCATACAATCTAGCATGTGGAGCATCACTGGACTGCACTGACCAAACCCTATTCAGCAGCAAAAAGGAGGGTGAGGGTCAGTGCACTGGCTCCGGTGAGTTGAAACTATCATGGTTTAATCGCGTCCGGAGTAGTTTTACCTTAAGAGAGAGTTCCTCCAAAGGAATATCTGTAAGAGATAGTTAG 2571 0.4675 MFPCSSRALFSRSRCVLRFDVVVLAIVLILFWLEAGTAKPVEHRLQWGSSEERTGNVASHSCIHDQIIEQRKRPGRKVYSVTPQVYEPGVLKPLQHRGRALLGVSSSVESQKDAKQPIRIYLNYDAVGHSSDRDCRKVGDIVKLGEPPLASLLGSPLCNPHADPPILGDCWHNCTSEDISGEDKKHRLRKALGQTADWFRRALAVEPVKGNLRLSGYSACGQDGGVQLPREYIEEGVSNADLVLLVTTRPTTGNTLAWAVACERDQWGRAIAGHVNVAPRHLTAEAETLLSATLIHEVMHVLGFDPHAFAHFRDERKRRRSQVTEQIMDEKIGRMVTRVVLPRVVMHSRHHYGAFSGNFTGLELEDGGGRGTSGSHWEKRLLMNEIMTGSVDTRSVVSKMTLALLEDSGWYKANYSMADRLDWGRNQGSEFVTSPCNLWKGAYRCNTTQFSGCTYNREAEGYCPILTYSGDLPLWAQYFPQANKGGQSSLADYCTYFVAYSDGSCTDTNSARAPDRMLGEVRGSNSRCMASSLVRTGFVRGSTTQGNGCYQHRCINNSLEVAVDGIWKVCPRAGGPIQFPGFNGELICPAYHELCNTAPVAVSGQCPNACNFNGDCVEGRCNCFLGFHGHDCSKHSCPSNCNGNGICLSNGICECKAGYTGIDCSTAVCDEQCSLHGGVCDNGVCEFRCSDYAGYTCQNSSMLLSSLSVCKEVLGKGISGQHCAPSEPSILQQLEEVVVMPNYHRLFPGGARKLFNIFGSSYCDEAAKRLACWISIQKCDGDGDNRLRVCHSACQSYNLACGASLDCTDQTLFSSKKEGEGQCTGSGELKLSWFNRVRSSFTLRESSSKGISVRDS 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03888 856 PANTHER LEISHMANOLYSIN-LIKE PEPTIDASE 4 829 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Aip06g03888 856 ProSitePatterns EGF-like domain signature 1. 653 664 IPR000742 -
Aip06g03888 856 Gene3D Leishmanolysin domain 4 500 595 - -
Aip06g03888 856 SMART egf_5 605 633 IPR000742 -
Aip06g03888 856 SMART egf_5 636 665 IPR000742 -
Aip06g03888 856 Gene3D - 110 301 - -
Aip06g03888 856 Gene3D Leishmanolysin domain 3 439 498 - -
Aip06g03888 856 PRINTS Leishmanolysin (M8) metalloprotease family signature 246 275 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Aip06g03888 856 PRINTS Leishmanolysin (M8) metalloprotease family signature 399 428 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Aip06g03888 856 ProSitePatterns EGF-like domain signature 2. 653 664 IPR000742 -
Aip06g03888 856 ProSiteProfiles EGF-like domain profile. 633 665 IPR000742 -
Aip06g03888 856 PANTHER METALLOENDOPEPTIDASE/ZINC ION-BINDING PROTEIN 4 829 - -
Aip06g03888 856 Gene3D Leishmanolysin , domain 2 311 436 - -
Aip06g03888 856 Pfam Leishmanolysin 172 597 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Aip06g03888 856 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 112 601 - -
Aip06g03888 856 Pfam EGF-like domain 637 664 IPR013111 -
Aip06g03888 856 Gene3D Laminin 605 634 - -
Aip06g03888 856 Gene3D Laminin 635 667 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03888 06 136573364 136580554 Aip06g03888 06 136573364 136580554 ECH