Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03886 ATGGATGTTTGCAGCCCTCTTAAATCCGATACTAAACTAAATCACCAACCTCTGACCCCTCTTAGGTTGTTAAGGGGTCTGTTATGTTTAGTGGTGTTTCTTTCCACAGCTTTTATGTTCTTAATCTATTTTGCACCAGTGGCAGTTGTAGCGTTGAGGCCTTTCAGCACACATTATAGTAGGAAGACAGTGTCATTCATCTTTTCGCTTTGGTTAGCTCTGTGGCCCTTTCTATTTGAAAAGATAAACAAAACTAAAGTTGTCTTTTCTGGTGATAGTGTTCCGTCAAAGGAACGTGTTTTACTTATTGCTAATCACAGAACTGAGGTTGATTGGATGTACTTGTGGAATCTTGCACTTCGTAAGGGAAGACTTGGATGCATAAAATACATCCTTAAAAGCAGCTTGATGAAATTGCCTATATTTGGTTGGGGATTTCACATTCTGGAGTTCATTGCAGTGGAGAGGAAGTGGGAGATAGATGAGAAAATACTGCACCATAAGCTTTCGACACTAAAGGGTCGTCAAGATCCTTTATGGCTAGCTCTTTTTCCAGAAGGAACCGATTATACTGAACAGAAGAGTCAAAATAGTCAAAAATATGCTTCTGAAGTTGGGCTACCTGTGCTGAAAAATGTGTTGCTGCCAAAAACAAAAGGGTTTCATGCTTGCTTGGAAGCTCTACGAGGCTCATTGGATGCAGTGTATGATGTGACTATCGCTTATAAAAATCAATGTCCAACTTTTCTGGACAATGTCTTCGGTGTGGATCCGTCTGAAGTCCACCTACATGTTTTGCGGATTCCGGTGGATGGGATTCCAGCTTGTGAAACTGAAGCTGCTTCATGGCTAATGAACGCATTCCAGAAGAAGGATCAATTGCTCTCTGATTTCAAGGTTCATGGTCATTTCCCTAACCAAATAAATGAAAAGCAACTTTCAACATCCAAGTGCATCGTTACTTATACTTTGGTGGTTGCTTTCACTGCGCTGTTCACATATTTCACCTTTTTCTCTCACATTTTGTTCAAGTTATACGTAGGTCTATCATGTGCGTATCTTGCTATTTCAACGCGCTATGATTTTCAATTGATGCCTTTTACATTCTATGTTAATGCACTCTTTAACAGCAAGAAACAAAAGAGTGGATAA 1152 0.3984 MDVCSPLKSDTKLNHQPLTPLRLLRGLLCLVVFLSTAFMFLIYFAPVAVVALRPFSTHYSRKTVSFIFSLWLALWPFLFEKINKTKVVFSGDSVPSKERVLLIANHRTEVDWMYLWNLALRKGRLGCIKYILKSSLMKLPIFGWGFHILEFIAVERKWEIDEKILHHKLSTLKGRQDPLWLALFPEGTDYTEQKSQNSQKYASEVGLPVLKNVLLPKTKGFHACLEALRGSLDAVYDVTIAYKNQCPTFLDNVFGVDPSEVHLHVLRIPVDGIPACETEAASWLMNAFQKKDQLLSDFKVHGHFPNQINEKQLSTSKCIVTYTLVVAFTALFTYFTFFSHILFKLYVGLSCAYLAISTRYDFQLMPFTFYVNALFNSKKQKSG 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03886 383 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 1 379 - -
Aip06g03886 383 CDD LPLAT_LCLAT1-like 76 265 - -
Aip06g03886 383 Pfam Acyltransferase 89 243 IPR002123 GO:0016746
Aip06g03886 383 SMART plsc_2 100 222 IPR002123 GO:0016746
Aip06g03886 383 PANTHER LYSOPHOSPHATIDYL ACYLTRANSFERASE 5-RELATED 1 379 - -
Aip06g03886 383 Pfam Acyltransferase C-terminus 254 312 IPR032098 -
Aip06g03886 383 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 36 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03886 Aip-Chr6 136559067 136562369 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03886 06 136559067 136562369 Aip05g00650 05 8196666 8200152 ECH
Aip06g03886 06 136559067 136562369 Aip01g00954 01 18224743 18228857 ECH
Aip06g03886 06 136559067 136562369 Aip06g03886 06 136559067 136562369 ECH