Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03877 ATGCGACGAGAACAAGTCCAGCCCGCTTGCCATTCAGATTTTGAGCCAGATAGATTGAGTTGCTTACCTGGTCATGTTATAGACCAAATTCTTTCGCATTTGCCCCTTCGGGAAGCAGTGAGAACAAGTGTGTTATCAAGCAAATGGAGGTACAAATGGGCAACGCTACCAAATCTTGTGTTTGATAACCAATGTCACTCGGTAGCTTCCCAAGATCATTCAGATATCAAGAACAAGCTTTTGAGAATCATCGATCACGTACTTTTACTTCATGCTGGGGCAATCAACAAGTTCAAGCTCTCCCATCGCGATCTCATTGGTGTGACTGATATTGATCGTTGGTCACTTCATCTAACCAGAAGGTCTCTCAAGGAGTTTGTGCTGGAAATCTGGAAAGGGCAGCGCTATAAGATACCATCGTGCTTATTTGCTTGTCAAAGTTTAGTTCATTTAGAATTGTTTAATTGTTGGCTTAAGCCTCCATCGACATTTCAAGGCTTTAAGAACTTGAAGAGTCTTGATCTGCAGCATGTTACCTTGGCTCAAGATGTGTTTGAAAACTTAATATCTAGCTGCCCTATGCTGGAACGATTAACGTTGATGAACTTTGATGGTTTCGCTAATCTCAACATTGATGCACCTAATCTTCAATTTTTTGACATTGGAGGCAAATTTGAAGATATCAGCTTCGAGAACACTTTCCAGTTATCTGTAGTATCCATTGGTTTGTATTTGAACTTTGAAACCAATCAAAATAGATTGCGTGGCAGTTCAAGCAATTTGCTCAAGTTTTTTGTTCATCTCCCTCATGTTCGAAGGCTAGAGGTTCAAAGCTATTTCTTAAAGTATTTGGCAATAGGGGCTGTGCCGCTAAAGCTTCCAAGACCATGCATTGATCTTAGTTACCTCTCCATTCGTATGAACTTCAATGATTCAAAGGAAATTTCAACTGCTTTATGCCTGCTAAGAAGCTCTCCTAATCTGCAAGAACTAGAAGTATTGGCTCGCCCTGATGAGCAGAACGTCCTGATACACCCTTATTGCGGGGAAGATGAATATTGTAGTTGTCCTATCATGCAACTGCGACATGTGAGGATAGATGGTGTCTCTGGTACCAAACCCGAATTAGATTTTATCAGTTTTCTGCTTCTGTATTCGCCGGTGCTAGAAAGGATGACTGTGAAGCCGGTTTCAAGCGGAGTGACTGAGTTGATGAAAGAGTTATTAAGGTTCAGGAGAGCTTCAGGGCGAGCTGAAATCATTTACCAAGAATCTCCTTGA 1281 0.4145 MRREQVQPACHSDFEPDRLSCLPGHVIDQILSHLPLREAVRTSVLSSKWRYKWATLPNLVFDNQCHSVASQDHSDIKNKLLRIIDHVLLLHAGAINKFKLSHRDLIGVTDIDRWSLHLTRRSLKEFVLEIWKGQRYKIPSCLFACQSLVHLELFNCWLKPPSTFQGFKNLKSLDLQHVTLAQDVFENLISSCPMLERLTLMNFDGFANLNIDAPNLQFFDIGGKFEDISFENTFQLSVVSIGLYLNFETNQNRLRGSSSNLLKFFVHLPHVRRLEVQSYFLKYLAIGAVPLKLPRPCIDLSYLSIRMNFNDSKEISTALCLLRSSPNLQELEVLARPDEQNVLIHPYCGEDEYCSCPIMQLRHVRIDGVSGTKPELDFISFLLLYSPVLERMTVKPVSSGVTELMKELLRFRRASGRAEIIYQESP 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03877 426 Pfam F-box domain 19 51 IPR001810 GO:0005515
Aip06g03877 426 SUPERFAMILY RNI-like 114 332 - -
Aip06g03877 426 ProSiteProfiles F-box domain profile. 16 50 IPR001810 GO:0005515
Aip06g03877 426 PANTHER F-BOX/RNI/FBD-LIKE DOMAIN PROTEIN 13 392 - -
Aip06g03877 426 Gene3D Ribonuclease Inhibitor 88 410 IPR032675 -
Aip06g03877 426 SUPERFAMILY F-box domain 16 61 IPR036047 GO:0005515
Aip06g03877 426 SMART 9598neu4hmm 355 423 IPR006566 -
Aip06g03877 426 Pfam Leucine Rich Repeat 169 193 IPR013101 -
Aip06g03877 426 PANTHER F-BOX PROTEIN-LIKE 13 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03877 Aip-Chr6 136443917 136446662 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03877 06 136443917 136446662 Aip06g03877 06 136443917 136446662 ECH