Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03876 ATGCCTGTCAACACCACCCCATTACTTGATAACAATAATGGAAACCATGGTATCATTAATGCTGAGAGTGATGATGAAAGGCCATTTAATTTGGTTAAAAAATTTGGATTTGAATCAAAGAAGTTATGGAAGTTAGCGGGGCCAGCAATAATCACAGCCTTGGCTCAGTTTTCACTTGGTGCACTCACTCAAACATTTGCTGGTTTGACCAGTGAGCTTGATCTTGCTGCTGTTTCTGTTGAAAACTCTGTTATTGCTGGCTTGGCTTTTGGAGTCATGTTGGGTATGGGGAGTGCATTGGAGACACTATGTGGGCAAGCATATGGTGCTGGTCAGATTAGAATGTTAGGAGTTTACATGCAAAGATCATGGATCATCTTGTTGACCACTGCCCTTATTTTGGTACCTATTTATGTTTGGTCTTCTCCCATCTTAAAGCTCATTGGAGAGACTGATGAAATCTCAGATGCTGCTGGAAAATTTGCTTTGTGGATGTTACCTCAATTGTTTGCTTATGCATTGAACTTCCCAATCCAAAAGTTCTTACAATCACAGAGGAAAGTTGCAGTGATGTTATGGATATCAATAATAGTGTTGGTGCTACATATATTTTTCAGTTGGCTCCTAATATTTAAGTTGGATTGGGGCTTAACTGGAGCAGCTATTACCCTTAATTCATCATGGTGGCTAATTGTCATTTTGGAATTAATATACATTTTCGTCACAAAATCTGATGGTGCTTGGAGTGGATTCACATGGCTAGCATTTGCGGATTTGTATGGTTTTGTCAAACTTTCTTTGGCTTCTGCTGTCATGTTATGCTTGGAGCTTTGGTACTTGATGATATTGGTGGTGATAACAGGGCGTCTGAAAAATCCTCTAATACCTGTTGATGCCATATCTATCTGTATGAATATAAATGGTTGGGATGCCATGATTGCAATTGGCTTCAATGCTGCAATAAGTGTGAGGGTATCAAATGAACTTGGAGGTGGTGATTTCAATGCAGCAAGATTTGCAGTGTGGGTGGTTTCCATAACCTCAGTTTCCATAGGAGTTATAATTATGATTATAGTACTCACAACAAGGGACTATTTTCCATACTTGTTCACAACAAGTGTTGCTGTTGCAAAAGAAACAACTAAGCTTGCTTCCTTATTAGGTGTTACAGTGCTTCTAAACAGCCTTCAACCTGTCCTATCCGGTGTTGCTGTTGGAGCTGGGTGGCAAGCTCTTGTAGCATACATCAACATTGGATGTTACTATATTGTTGGTTTACCAGCTGGGATACTTTTGGGATTCACATTTGGTTTTGGAGCAGAGGGTATTTGGTCAGGGATGATTGGAGGCATAGCTTTGCAAACCATAATCCTTATCATCGTCACATCAGTAACCAACTGGAGAAAAGAGGCTGATGTAGCTGAAAGTCGCGTGAAGAAGTGGGGAGGATCAATTGCTTATGAACAATGA 1470 0.402 MPVNTTPLLDNNNGNHGIINAESDDERPFNLVKKFGFESKKLWKLAGPAIITALAQFSLGALTQTFAGLTSELDLAAVSVENSVIAGLAFGVMLGMGSALETLCGQAYGAGQIRMLGVYMQRSWIILLTTALILVPIYVWSSPILKLIGETDEISDAAGKFALWMLPQLFAYALNFPIQKFLQSQRKVAVMLWISIIVLVLHIFFSWLLIFKLDWGLTGAAITLNSSWWLIVILELIYIFVTKSDGAWSGFTWLAFADLYGFVKLSLASAVMLCLELWYLMILVVITGRLKNPLIPVDAISICMNINGWDAMIAIGFNAAISVRVSNELGGGDFNAARFAVWVVSITSVSIGVIIMIIVLTTRDYFPYLFTTSVAVAKETTKLASLLGVTVLLNSLQPVLSGVAVGAGWQALVAYINIGCYYIVGLPAGILLGFTFGFGAEGIWSGMIGGIALQTIILIIVTSVTNWRKEADVAESRVKKWGGSIAYEQ 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03876 489 MobiDBLite consensus disorder prediction 1 19 - -
Aip06g03876 489 PANTHER PROTEIN DETOXIFICATION 33 24 475 - -
Aip06g03876 489 Pfam MatE 48 208 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip06g03876 489 Pfam MatE 269 429 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip06g03876 489 MobiDBLite consensus disorder prediction 1 20 - -
Aip06g03876 489 TIGRFAM matE: MATE efflux family protein 48 444 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip06g03876 489 CDD MATE_eukaryotic 38 471 IPR045069 GO:0042910|GO:1990961
Aip06g03876 489 PANTHER MULTIDRUG RESISTANCE PROTEIN 24 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03876 Aip-Chr6 136436856 136442727 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03876 06 136436856 136442727 Aip06g03876 06 136436856 136442727 ECH