Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03869 ATGAGAGGGGATGGGGAAGAAGCCACCGGTGTCTCGCGTCCCCCGGCGGGAATCCACTCGGAACGGACGCCCTCGGCCGACTTCTTATCGGACAATGAGCTTTCCATGCAATCCAACACCGCCGCCTCCCCTATGAGCCCTTACTATGATCCTGGCCGCCTCAGCGGCGAGGGATCCCCATTGACGATGTCACCATGGAACCAAACCGCAAATTCGCGATTCTCAAAGGAATTATGCTCCCAAGGCGGCGAAAGCACCGCACAAAGTGCTCTCCTCGGCTCCCTGGTCCGCGAGGAGGGACACATATACTCCTTGGCTGCCACCGGTAACCTCCTTTACACTGGCTCAGAGAGCAAGAACATCCGTGTGTGGAAGAACCTCCAAGAATTCTGTGGCTTCAAATCAAACAGTGGTTTGGTTAAGGCCATCATAATATCTGGACATAAAATCTTCACGGGTCACCAAGATGGTAAAATTCGAGTTTGGAAGGTTAACCCTAAGGCACCAAATGTTCACAAACGCGCAGGAACGTTGCCAACGTTGAAAGATATACTCAAGAGTTCTCTCAAACCAAGTAACTACATTGAAGTTCGGAAAAATCGTTCAGCACTTTGGATTAAGCATTCTGATGCAGTTTCCGCCTTAAGCCTTTCTCATTGTAAAACATTGCTCTATTCAGCTTCGTGGGATAAAAGCATAAAGGTGTGGCGCATCTCCGACAAGAGGTGCATGGAATCCATCCCGGCTCACCAAGATACGGTGAACTCCGTGGTGTGCGGCGTCGATGGCCTCGTCTTCTCCGGCTCCGCCGATGGAACCGTCAAGATGTGGAAGCGGGAAACTCCCTCCTCCCGCTCCACCAAGTGCACCAAACACACCAATGCACAAACCCTGCTCAAGCAAGAATCCGCCGTCACCGCCCTCACCCTCGATGCCTCCTTCTCTACCCTCTACTGCGGCTCCTCCGACGGTCTCGTCAACTTCTGGGACAGTAACAATAACTTCGCCCATGGCGGCGTCCTTAAAGGCCACAAACTAGCCGTCCTATGCCTCGCCGCTGCCGGAACCTTAGTTTTCAGCGGATCCGCCGACAAGACGATCTGCGTGTGGAAGAAGGAGGGAACGATCCACACGTGCGTGTCGATGTTGACGGGGCACGAGGGTCCAGTGAAGTGTCTGGCGGTGGAGGAAGACAAGGAGGCGAAGGCGCGTGGTGGTGAGAGGCGGTGGGTGTTGTACAGTGGGAGCTTGGATAATTCTGTAAAGGTATGGAGCGTTGCTGATGTTGGAGGTGGTGATAATCAGGAGCAGCAGCGCCACCACCGTATGTTTTCTGATTCAGATTCAATACCATTTGCTGAATCTGTTAGTAGCTACTCTTCTTCGTGCCGGAGCAATAACAGAAAATAA 1410 0.5291 MRGDGEEATGVSRPPAGIHSERTPSADFLSDNELSMQSNTAASPMSPYYDPGRLSGEGSPLTMSPWNQTANSRFSKELCSQGGESTAQSALLGSLVREEGHIYSLAATGNLLYTGSESKNIRVWKNLQEFCGFKSNSGLVKAIIISGHKIFTGHQDGKIRVWKVNPKAPNVHKRAGTLPTLKDILKSSLKPSNYIEVRKNRSALWIKHSDAVSALSLSHCKTLLYSASWDKSIKVWRISDKRCMESIPAHQDTVNSVVCGVDGLVFSGSADGTVKMWKRETPSSRSTKCTKHTNAQTLLKQESAVTALTLDASFSTLYCGSSDGLVNFWDSNNNFAHGGVLKGHKLAVLCLAAAGTLVFSGSADKTICVWKKEGTIHTCVSMLTGHEGPVKCLAVEEDKEAKARGGERRWVLYSGSLDNSVKVWSVADVGGGDNQEQQRHHRMFSDSDSIPFAESVSSYSSSCRSNNRK 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03869 469 MobiDBLite consensus disorder prediction 1 67 - -
Aip06g03869 469 ProSiteProfiles Trp-Asp (WD) repeats profile. 205 246 IPR001680 GO:0005515
Aip06g03869 469 ProSiteProfiles Trp-Asp (WD) repeats profile. 298 330 IPR001680 GO:0005515
Aip06g03869 469 ProSiteProfiles Trp-Asp (WD) repeats profile. 341 371 IPR001680 GO:0005515
Aip06g03869 469 SUPERFAMILY WD40 repeat-like 98 427 IPR036322 GO:0005515
Aip06g03869 469 CDD WD40 99 425 - -
Aip06g03869 469 ProSiteProfiles Trp-Asp (WD) repeats profile. 247 287 IPR001680 GO:0005515
Aip06g03869 469 SMART WD40_4 240 278 IPR001680 GO:0005515
Aip06g03869 469 SMART WD40_4 334 371 IPR001680 GO:0005515
Aip06g03869 469 SMART WD40_4 88 125 IPR001680 GO:0005515
Aip06g03869 469 SMART WD40_4 291 330 IPR001680 GO:0005515
Aip06g03869 469 SMART WD40_4 199 237 IPR001680 GO:0005515
Aip06g03869 469 SMART WD40_4 126 163 IPR001680 GO:0005515
Aip06g03869 469 SMART WD40_4 376 425 IPR001680 GO:0005515
Aip06g03869 469 PANTHER PROTEIN JINGUBANG 30 448 - -
Aip06g03869 469 PRINTS G protein beta WD-40 repeat signature 265 279 IPR020472 -
Aip06g03869 469 PRINTS G protein beta WD-40 repeat signature 412 426 IPR020472 -
Aip06g03869 469 PRINTS G protein beta WD-40 repeat signature 224 238 IPR020472 -
Aip06g03869 469 Pfam WD domain, G-beta repeat 242 278 IPR001680 GO:0005515
Aip06g03869 469 Pfam WD domain, G-beta repeat 208 236 IPR001680 GO:0005515
Aip06g03869 469 Pfam WD domain, G-beta repeat 379 425 IPR001680 GO:0005515
Aip06g03869 469 Pfam WD domain, G-beta repeat 99 125 IPR001680 GO:0005515
Aip06g03869 469 Pfam WD domain, G-beta repeat 339 371 IPR001680 GO:0005515
Aip06g03869 469 MobiDBLite consensus disorder prediction 25 45 - -
Aip06g03869 469 Gene3D - 84 182 IPR015943 GO:0005515
Aip06g03869 469 Gene3D - 194 460 IPR015943 GO:0005515
Aip06g03869 469 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 205 239 - -
Aip06g03869 469 PANTHER F-BOX AND WD40 DOMAIN PROTEIN 30 448 IPR045182 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03869 Aip-Chr6 136323239 136325439 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03869 06 136323239 136325439 Aip06g03869 06 136323239 136325439 ECH
Aip07g02760 07 112661504 112664464 Aip06g03869 06 136323239 136325439 PCT