Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03861 ATGTTGACAAATTCTCTTCCATCAATAATGCAAACCTTGTTAGCATCATCACCCCCTAAATTTCAAGGACCAGATTTGTCCTTAAACATAAGCCCTCCATGTGTTGGTGTTTCAGATTCCGAAAACAACAACAACCTCAACAACAACAACATGAACATGAACATGTTCCTAAGTAGTAGGAAGAAAATTCTTTACAATGATATAAGTACTAGTTCAACTACTTCAGATTCAGGTGGTAGTAGTTGTGGAAGTGCAAGTGACTTAAGCCATGAAAACAACAACCTCAACCTTCTTCATCATGAACCTACATTGACCTTAGATTTGAATAATTACCATCATCATCATCAAGGACTTTCTAGAAGCTTTAACAATCACCACCATTTCCAACCTCAAATCTATGGCCGCGAGTTCAAGAGAAGCTCCAGGGTCATTAATGGAGTCAAGAGGAGCGTGAGAGCACCTAGGATGAGATGGACAACAACCCTCCATGCCCATTTTGTTCATGCTGTTCAACTCCTTGGTGGCCATGAAAGGGCAACACCAAAGTCAGTTTTAGAGTTAATGAATGTTAAGGATCTAACCCTAGCACACGTCAAAAGTCACTTACAGATGTATAGAACAGTGAAGAGCACTGACAAAAGCACAGGTCATGGCCAGACAGATATGGGTTTAATCCCAATGCCAAGGATTAATAATGTTGCTCATTTGCATGCCAATAATGGAGTTTCAGCTTCTCATGATGATAGACCAAATAATTTACCACATCCACCACAAAATTATTCCCAAAGGTCATGGCAATCATCAATAATGGAGGCAAATACAAACAATAGTAGACAAAAACCCCAAATTGGTTTGACGGATTCTCATACAAAGGGATATGAAACCATGGTGGAAGAGCACAATTGTGGGGGCATGTCTAATTGCATGAAGGAGAATAAGTTGGATTCTACTCCATTGTCAAGTTCTGATGAGTTGATGCTTGATCTTGAATTCACCCTTGGAAGGCCAAATTGGGAAAAGGAACATCAAAAGGAGTCATCAAGAGTAGAATTAACCCTTCTCAAATGTTAA 1071 0.395 MLTNSLPSIMQTLLASSPPKFQGPDLSLNISPPCVGVSDSENNNNLNNNNMNMNMFLSSRKKILYNDISTSSTTSDSGGSSCGSASDLSHENNNLNLLHHEPTLTLDLNNYHHHHQGLSRSFNNHHHFQPQIYGREFKRSSRVINGVKRSVRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDKSTGHGQTDMGLIPMPRINNVAHLHANNGVSASHDDRPNNLPHPPQNYSQRSWQSSIMEANTNNSRQKPQIGLTDSHTKGYETMVEEHNCGGMSNCMKENKLDSTPLSSSDELMLDLEFTLGRPNWEKEHQKESSRVELTLLKC 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03861 356 Pfam Myb-like DNA-binding domain 155 206 IPR001005 -
Aip06g03861 356 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 154 207 IPR006447 GO:0003677
Aip06g03861 356 MobiDBLite consensus disorder prediction 240 261 - -
Aip06g03861 356 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 348 - -
Aip06g03861 356 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 348 IPR044847 GO:0000976|GO:0006355|GO:0010158
Aip06g03861 356 Gene3D - 153 210 - -
Aip06g03861 356 SUPERFAMILY Homeodomain-like 151 208 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03861 Aip-Chr6 136277983 136283606 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aip06g03861 Myb_DNA-binding 1.6e-05 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03861 06 136277983 136283606 Aip06g03861 06 136277983 136283606 ECH
Aip06g03861 06 136277983 136283606 Aip07g02640 07 109603456 109606224 PCT