Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03835 ATGGCTCTGAACGACTTCTTCGCCGGCGAGATCGCGACGGAGCTCATGAAGATGCTGATAAGCATATCACGCAAGTCACTCCTCTGCAGAACAAGCGCTGATCAGCTCAGAACTTACATCAACGAATTACTCCCTACCATTCAAGAGATCAAGTACTCCGGCGTCGAGCTTCCCGCCGATAGGCAGCGTCAGCTCGACCGCTTTTCCGAGATTCTTCGCTCCGGCGTCGAGCTCTCACATAAGGTTCTTAATTCGAACCGGTGGAACGTGTACAAGAACTTGCAGCTAGCGAAGAAGATGGAGAAGCTTGAGAAGACCGTGTCACGGTTTGTGCAAGGTCCAATGCAGGCTCACATATTGGCTGATGTGCACCACTCCCGTGTTGAGATGGCCGAGAGGCTCGACCGGGTCGATGCGTCACACCAGAGGCTAGAGCAGTACTTTAGTGCCATGAAGATAGGAGTGGGAGGAGGAGGGTGGATAGAGGAGGCTGTGAGCAGCATGGAGGTGGATGAGAGTGGGGTGGAGGGTAATTTGGGGAATTTAGGTGTAGGTTTGGAACTTGGAAAGAAGAAGGTTAAGGAAATGGTAATTGGAAGGAatgatatttgggttgttgggatttgtgggattggtggctcagggaagactacacttgctaGAGAAGTATGCAAAGATGAACAAGTCAGAAGTCATTTCAAGGAAAGAATCTTGTTCCTAACAGTGTCACAATCTCCAAATGTGGAGCAACTAAGAGCAAAGATATGGGGTTTCATTATGGGAAATCAAGGCTTCATAAGTTCAAATTATGTTGTTCCTCAAAGAATGCCACAAACTGAATGCAGGAGTGAAGTTCAAAGATTGATTGTTCTTGATGATGTTTGGTCCCTCTCTGTGTTAGAACATCTTGTGTGCAGAGTACATGGTTGCAAGTTCATTGTGGTTTCGAGAGAGAGATTTCCAACAATTTTCAATGCTACTTATGAAGTGGAATTGCTGAGTAAAGAGGAAGCATTAGCTTTGTTCTGTCACCATGCTTTTGGTCAAAAATCAATTCCTTTAGATGCTGATAGGAATTTGGTCAACCAGGTTGTGACTGAATGTGGAAGGCTTCCGTTAGCTCTTAAAGTGATCGGAGCTTCGTTGCGCGATCAGACCGAGATGTTCTGGGCTAGTGTCAAGAACAGGCTATCTCAAGGACAAAGCATTGGTGAATCCTATGAAATCAACCTCATTGATAGAATGGCAATCAGCACAAATCACTTACCAGAAATGATCAAAGAATGCTTCTTAGATCTTTGTTCATTCCCTGAGGATAAGAAGATTCCACTAGATGTTCTCACTAATATGTGGGTTGAAATCCATGATATTGATCAGAAAGAAGCTTTTGCAATTGTTGTGGAGCTCTCAAACAAGAATCTTCTCACATTAGTGAAAGAGGCTCGTGCTGGTGGCATGTATAGCAGCTGCTTTGAGATCTCCATTACCCAGCATGATATACTGAGAGACCTTGCTCTTAATTTGAGCAATCGCAGCAGCATCCGTGAACGCCGCCGATTAGTTATGCCTAAACGGGAAGATGACGGCCGACTGCCTAAACAATGGTTGAGATATAAGGACAGGCCATTTGAGGCTCAGATCGTTTCAGTTCACACAGGTGAAATGAAAGAAGAAGATTGGTGTCACCTTGAGTTTCCTAATGCCGAAGTTTTGATCATCAATTTCACATCCAATGAATACTACTTACCTCCCTTCATTGCAAAAATGCCAAATTTGAGGTCATTAATTATCATAAACTATAGTGCATCATATGCTTCCCTTCACAATGTATCAGTTTTTCAGAATTTGACCAATCTTAGAAGCCTTTGGCTTGAAAAAGTTTCAACCCCTCAATTATCAGGCACTATAATGAAAAGCTTAGGGAAATTATTCATAGTCCTATGCAAATTAAATAATAGTTTAGAGGGTAAAGAAGCAAACCTAGCACAAGCATTTCCCAACCTAAGTGAACTCACTCTTGATCATTGTGATGATGTTACTGAATTACCCTCAAGCATTTGTGAGATACATTCACTTCAAAACTTGAGTCTCACAAACTGTCACAATTTGACCAAATTGCCCTCAGAACTAGGCAAGCTAAGATCACTTGGGATACTAAGACTATATGCTTGTCCAGAACTGAAATCACTTCCTAGTAGCATATGTGACATGATTAAGTTGAAGTATATAGACATATCTCAATGTGTTAACCTTGCAATGTTCCCTAATGAGATTGGAAAATTGGTGAATTTAGAGAAGATTGACATGAGGGAATGCCCTATGATTAAGAGTTTACCAAAGTCAACAGTGTCATTGAAGAATCTGAGGCTTGTGATATGTGATGAGGAGGTACAAGAGGTTTGGAATGAGGTTGAGAAGGCAAAACCAAATCTCCACATTAAAGTCTCAGAGCAATACTATGATTTGGATTGGCTTAAAGAGTGA 2484 0.4122 MALNDFFAGEIATELMKMLISISRKSLLCRTSADQLRTYINELLPTIQEIKYSGVELPADRQRQLDRFSEILRSGVELSHKVLNSNRWNVYKNLQLAKKMEKLEKTVSRFVQGPMQAHILADVHHSRVEMAERLDRVDASHQRLEQYFSAMKIGVGGGGWIEEAVSSMEVDESGVEGNLGNLGVGLELGKKKVKEMVIGRNDIWVVGICGIGGSGKTTLAREVCKDEQVRSHFKERILFLTVSQSPNVEQLRAKIWGFIMGNQGFISSNYVVPQRMPQTECRSEVQRLIVLDDVWSLSVLEHLVCRVHGCKFIVVSRERFPTIFNATYEVELLSKEEALALFCHHAFGQKSIPLDADRNLVNQVVTECGRLPLALKVIGASLRDQTEMFWASVKNRLSQGQSIGESYEINLIDRMAISTNHLPEMIKECFLDLCSFPEDKKIPLDVLTNMWVEIHDIDQKEAFAIVVELSNKNLLTLVKEARAGGMYSSCFEISITQHDILRDLALNLSNRSSIRERRRLVMPKREDDGRLPKQWLRYKDRPFEAQIVSVHTGEMKEEDWCHLEFPNAEVLIINFTSNEYYLPPFIAKMPNLRSLIIINYSASYASLHNVSVFQNLTNLRSLWLEKVSTPQLSGTIMKSLGKLFIVLCKLNNSLEGKEANLAQAFPNLSELTLDHCDDVTELPSSICEIHSLQNLSLTNCHNLTKLPSELGKLRSLGILRLYACPELKSLPSSICDMIKLKYIDISQCVNLAMFPNEIGKLVNLEKIDMRECPMIKSLPKSTVSLKNLRLVICDEEVQEVWNEVEKAKPNLHIKVSEQYYDLDWLKE 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03835 827 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Aip06g03835 827 Gene3D - 180 322 IPR027417 -
Aip06g03835 827 PRINTS Disease resistance protein signature 205 220 - -
Aip06g03835 827 PRINTS Disease resistance protein signature 281 295 - -
Aip06g03835 827 PRINTS Disease resistance protein signature 368 382 - -
Aip06g03835 827 PRINTS Disease resistance protein signature 687 703 - -
Aip06g03835 827 Gene3D Ribonuclease Inhibitor 546 811 IPR032675 -
Aip06g03835 827 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 433 IPR027417 -
Aip06g03835 827 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 3 824 - -
Aip06g03835 827 Gene3D - 332 411 IPR042197 -
Aip06g03835 827 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 824 IPR044974 GO:0006952
Aip06g03835 827 SUPERFAMILY L domain-like 567 791 - -
Aip06g03835 827 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 9 134 IPR008808 -
Aip06g03835 827 Pfam NB-ARC domain 191 413 IPR002182 GO:0043531
Aip06g03835 827 Gene3D - 413 504 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03835 Aip-Chr6 136060956 136065262 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03835 573 801 Receptor kinase-like Gene Family AT1G08590 25.541 1.12e-09 60.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03835 06 136060956 136065262 Aip06g03835 06 136060956 136065262 ECH