Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03833 ATGCCTCCAATAATTTCACGCAAACCATCATCACCACCATCATGTGTTGTGCATGATCATCATGATGAAAGAACCAAGAAGAAACAAAGCAACTATGAGAGATCAAAAACATGTAACAGTATCAACACCAACGTTCTTGATGAGGTTAAGCATGTTACAAGGCAGAGGAAGTTGGTTAGGCACCTTAAGGACAAAGAAGTCTTTGGTTTGTTGCATTTGCACTCCACAGTCAATTGTTCTTGTTCTTCTTCGCCGGAGTTGCCCGTGTCGTCGAAGTCCTGCTCGCGAGGCGGCAGTTCTAGCATCAGCTGCGGACACTGGTCTATTTCTGCTGTGCCGCAGCCGTTGCCACTCCCCGAGTCATCATCAGCTTCATTGGTGATGACTCGGAGAGCTGAGTCAACGGGCCTCGGATTAGGCCATGTCCACCTGCTTGGATCTCCTTCCACAGAACATCCTAATTTTGCTTTGACTTTGAGGAAAACAGTGAATCATGGTGCATTGACATGTACAAAACCTTCAAGCAATTTGGATAGACCCTCTGCAGAGCTTACAACTATAGCAAAAGCAAAAAATAATCTGAGAGTGCACATTCCAGCTAAAAGTTTCTTGGCAGGGAATAGTTCATGCAAAATTCCCCCATCATTGTGTCATTATGATGAAAATGATGATGATGATTGTGTGAGTATTTCTGGTTTGAGCATGCATGTTGCTGCTAAGAGTGCTCCATCAAGTGTCTTCTCTAGTCCAGTCACTAGTCCACATGGATCAAACAACAATCCACAACATTTCTTTGATCATCACACCATCAATAATTTCCTTCAACAATTCAATGACAATGTTTTGAATTTGGATCATCATCATCATCATCACCACCTACCACAAGCTAATAATAACAAAAATAATGTTCATATTTGCCCTGCTAGCTTAAGTACTGCTTATTCTTCTAATCCCAAACATAACCATGTTGATGCACATCCCTTGCCACTTCCTCCTAGAGTTTTATCATCAATGATCCTACATCAACCATCACCTTCTTCAATGAAAGGCCAATGGCAGAAAGGGAAACTAATCGGTCGCGGAACCTTTGGAAGTGTTTATCATGCAACCAACCTAGAAACTGGAGCTTCTTGTGCAATGAAGGAAGTGGATATAATTCCTGATGATCCTACATCTGCTGAGTGCATAAAGCAACTAGAACAGGAAATCAAAATCCTTCATCAACTACACCACCCCAATATAGTGCAGTATTATGGAAGTGAAATAGTTGGTGATCATTTGTACATATATATGGAGTATGTTCATCCAGGATCAGTTAATAAATTTATTAGGGAGCATTGTGGAGCTATGACAGAATCTGTAGTTCGAAATTTCACAAGACACATTCTCTCTGGATTGGCCTACTTACATAGCACCAAGACTATTCACAGGGATATCAAAGGTGCAAACTTGCTTGTTAATGAATCTGGCATTGTCAAGCTTGCAGATTTTGGGATGGCCAAAATTCTTTCAGGGAATTCATATGAACTTTCTTTGAAGGGAAGTCCTTATTGGATGGCTCCTGAGGTGATGAAAGCTGCCATTAAGAATGAATCAAATCCTGATGTTGCCATGGGCATTGATATATGGAGCTTAGGCTGCACTATTATTGAAATGTTGTCAGGAAAGCCTCCTTGGAGTGACCTTGAAGGGCCATCAGCAATGTTCAAGGTACTACAGAGCACACCACCAATACCAGAGAGTTTATCATCAGTGGGAAAGGATTTCCTGCAGCAATGTTTCAGAAGGGACCCTGCTGATAGACCTTCTGCAGCAATGCTTCTTAACCATCCCTTTCTCCACAACTTTCATGATCAAGATAATCCTCTAATTCATCCTCATTTAAATTTGTGTCACAAAGGAGACCAAGGACAAGGAGATAATTCGTCTAGTCCCAAAGATAATACCAAAAATAGACATGATGTATTGCCAGCCTCCATGAGCACAAAGATTTTCAACAAAACTCAGAAATTAATGGGTGCTGAGGAATCTAAACACATTATTATAGCTTCCCATCACAATCTTCAATCTTCAGTTAAAGCTGGCACCTTCAATTACTTGTCTCTTGCAAAGTCCAGCAACCTGTCATCCCTGCCTCACTCAAATTTGAAGCATGTCATGAGCTGA 2166 0.4123 MPPIISRKPSSPPSCVVHDHHDERTKKKQSNYERSKTCNSINTNVLDEVKHVTRQRKLVRHLKDKEVFGLLHLHSTVNCSCSSSPELPVSSKSCSRGGSSSISCGHWSISAVPQPLPLPESSSASLVMTRRAESTGLGLGHVHLLGSPSTEHPNFALTLRKTVNHGALTCTKPSSNLDRPSAELTTIAKAKNNLRVHIPAKSFLAGNSSCKIPPSLCHYDENDDDDCVSISGLSMHVAAKSAPSSVFSSPVTSPHGSNNNPQHFFDHHTINNFLQQFNDNVLNLDHHHHHHHLPQANNNKNNVHICPASLSTAYSSNPKHNHVDAHPLPLPPRVLSSMILHQPSPSSMKGQWQKGKLIGRGTFGSVYHATNLETGASCAMKEVDIIPDDPTSAECIKQLEQEIKILHQLHHPNIVQYYGSEIVGDHLYIYMEYVHPGSVNKFIREHCGAMTESVVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVNESGIVKLADFGMAKILSGNSYELSLKGSPYWMAPEVMKAAIKNESNPDVAMGIDIWSLGCTIIEMLSGKPPWSDLEGPSAMFKVLQSTPPIPESLSSVGKDFLQQCFRRDPADRPSAAMLLNHPFLHNFHDQDNPLIHPHLNLCHKGDQGQGDNSSSPKDNTKNRHDVLPASMSTKIFNKTQKLMGAEESKHIIIASHHNLQSSVKAGTFNYLSLAKSSNLSSLPHSNLKHVMS 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03833 721 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 25 701 - -
Aip06g03833 721 Gene3D Transferase(Phosphotransferase) domain 1 349 651 - -
Aip06g03833 721 Pfam Protein kinase domain 353 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03833 721 SUPERFAMILY Protein kinase-like (PK-like) 337 630 IPR011009 -
Aip06g03833 721 MobiDBLite consensus disorder prediction 14 33 - -
Aip06g03833 721 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 25 701 - -
Aip06g03833 721 MobiDBLite consensus disorder prediction 1 33 - -
Aip06g03833 721 SMART serkin_6 352 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03833 721 ProSitePatterns Protein kinases ATP-binding region signature. 358 381 IPR017441 GO:0005524
Aip06g03833 721 MobiDBLite consensus disorder prediction 629 654 - -
Aip06g03833 721 ProSiteProfiles Protein kinase domain profile. 352 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03833 Aip-Chr6 136039006 136045112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03833 316 615 MAP Kinase Kinase Kinase AT5G66850 66.774 1.72e-149 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aip06g03833 Pkinase 1.8e-67 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03833 06 136039006 136045112 Aip07g02653 07 110002012 110006609 PCT