Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03828 ATGATATCTTTGAAACTACTTTTGTTCATGAATTTGTCCATCATCATCATCACCACATGCAAGGCCAATCCTAACCAACAAGGTGAACACCTCTCTAAGTTCATTCATTCAAAGAGGTCTCATAATAATAATAACAACAATCCATCATCATCATCATTAGAAGCTTTCCTTTCTCATCTTCCACAACTACATGTTGTTGATGATGATGATGATCAAGAATCTAAGCTTAAAGAAGATGATAAAGTTGAAGGTCTACCAGGACAACCTGAAGGAGTGGATTTTGATCAATATGCTGGCTATATAACTCTTGATGCAAACAAAGGGAAAGCACTCTTCTACTACTTTGTTGAATCACCTCAAAATTCTTCCACCAACCCTCTTCTTCTATGGCTCAATGGAGGTATATTTGCAAACGTGATTTTCCTAGAATCACCAGCAGGTGTTGGATTTTCATATTCAAACACTTCCTCGGACTATGCTGAAATTGGTGACAGCATCACCGCCTTGGATTCTTACACATTCCTTGTGAAGTGGCTTGAGAGATTCCCACACTACAAAACACGTGACTTCTTCATAACTGGAGAAAGCTATGCTGGCCATTATGTCCCTCAGCTTGCTCACACTATTCTCTCATATAATAACATTGCAGCGTCAATTCACCAAACAGTTATCAACTTAAAAGGAATTGCGGTTGGAAATGGATGGATAGATGATAATTTGTGTACAAAGGGTATGTATGATTATTATTGGTCACATGCTCTAAGCTCTGACGAATCCCATTCTGGAATTGAAAAATATTGTGACTATGTTAGCGGTAATTTCTCTTATGAATGCATCAAATATATGAACATGGCTGATGTTGAAGTTGGTGATATTGACATATACAACATATATGCTCCACCTTGTGATTCTTCATCTTCATCAAAATCTCCTGGCAATGATTTCGACCCTTGTTCTGATCATTACACAATGTCCTACTTGAATCTCCCAGAAGTTCAAAAGGCCCTTCATGCTAAAGCCACAAATTGGTCTTCTTGCAGCCTGGTGGGATGGACGGATAGTCCAGCAAGTATTCTACCAACTATAAATAGATTAATATCAAGTAACATAAGCATCTGGATTTATAGTGGCGACACAGATGGTCGAGTTCCCATAACTTCATCTAGGTATTCAATAAATGCCCTCAAACTTCCAGTACAAACACCTTGGCGTTCATGGTATTCTGCCAATCAGGTTGGAGGATATGTTGTTGGGTATAAAGGGCTCACTCTTGTAACTGTAAGAGGAGCAGGGCACACTGTTCCAAGCTACCAACCTCAGAGGGCACTAACCATGATCTCATATTTTCTCAATGGAGAACTTCCACCAAAGAATTAA 1377 0.39 MISLKLLLFMNLSIIIITTCKANPNQQGEHLSKFIHSKRSHNNNNNNPSSSSLEAFLSHLPQLHVVDDDDDQESKLKEDDKVEGLPGQPEGVDFDQYAGYITLDANKGKALFYYFVESPQNSSTNPLLLWLNGGIFANVIFLESPAGVGFSYSNTSSDYAEIGDSITALDSYTFLVKWLERFPHYKTRDFFITGESYAGHYVPQLAHTILSYNNIAASIHQTVINLKGIAVGNGWIDDNLCTKGMYDYYWSHALSSDESHSGIEKYCDYVSGNFSYECIKYMNMADVEVGDIDIYNIYAPPCDSSSSSKSPGNDFDPCSDHYTMSYLNLPEVQKALHAKATNWSSCSLVGWTDSPASILPTINRLISSNISIWIYSGDTDGRVPITSSRYSINALKLPVQTPWRSWYSANQVGGYVVGYKGLTLVTVRGAGHTVPSYQPQRALTMISYFLNGELPPKN 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03828 458 Gene3D alpha/beta hydrolase 136 304 IPR029058 -
Aip06g03828 458 Gene3D - 318 349 - -
Aip06g03828 458 PRINTS Carboxypeptidase C serine protease (S10) family signature 142 152 IPR001563 GO:0004185|GO:0006508
Aip06g03828 458 PRINTS Carboxypeptidase C serine protease (S10) family signature 422 435 IPR001563 GO:0004185|GO:0006508
Aip06g03828 458 PRINTS Carboxypeptidase C serine protease (S10) family signature 178 203 IPR001563 GO:0004185|GO:0006508
Aip06g03828 458 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 20 134 IPR001563 GO:0004185|GO:0006508
Aip06g03828 458 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 137 454 IPR001563 GO:0004185|GO:0006508
Aip06g03828 458 ProSitePatterns Serine carboxypeptidases, histidine active site. 422 439 IPR033124 GO:0004185
Aip06g03828 458 ProSitePatterns Serine carboxypeptidases, serine active site. 192 199 IPR018202 GO:0004185
Aip06g03828 458 Gene3D - 358 452 - -
Aip06g03828 458 Pfam Serine carboxypeptidase 137 452 IPR001563 GO:0004185|GO:0006508
Aip06g03828 458 Pfam Serine carboxypeptidase 86 134 IPR001563 GO:0004185|GO:0006508
Aip06g03828 458 SUPERFAMILY alpha/beta-Hydrolases 82 453 IPR029058 -
Aip06g03828 458 Gene3D alpha/beta hydrolase 74 135 IPR029058 -
Aip06g03828 458 PANTHER CARBOXYPEPTIDASE 20 134 - -
Aip06g03828 458 PANTHER CARBOXYPEPTIDASE 137 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03828 Aip-Chr6 135979970 135984902 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03828 06 135979970 135984902 Aip06g03828 06 135979970 135984902 ECH