Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03819 ATGAGCAGCGATGCACGAGAGAAGAGAAAGAGACGCAGCGTGGAGGGAGAGGCAGCAATGGCGAACCATATAGGTGGAGCGACAGCACACTGTAGAGGTGCAGTGGCGGCGGCCCAGAAAAACTTCATAATCGACCACCACAATCTACAGCCACCATTCCAATATCTACTGTCCACTTGTCTTCTTTCGTTTCTCACCACTGGCCGCCGCCCACAAACCCTCTCACCGTCGCACTCCCCCAGTCCCCCTAACTCCCTCACCCTCGCAGATTCCCTCCCCAAAACAAGGAACGTCGTTGCCGTCTTCACGCGTCAGGAGCGTCCCGTCGTCGCCTTCTTCGTCGCGTCACGAGCGTTGCACCGTCACCTTCTTTGTCGCGTCAGGAGCGAGTGCCGTCGCCGCCTTCGTCGCAGCAGAAGTGAGCGTTGCACTGTCGCCGTTCTCGTCGTAGCAGGAGCATCGCGCCGTCGCCGCCTTTGTGGTAGCAGGAGCATCGCGCCGTCGCTGTTTAGTGAGCATCGCTGTTCTTCGCCGTTTCTGCAATTTCCTTTTTTTGTGATTCATGTGATTTTCGGGAGGGAAGAGAAAGGGAGGCGTGGGGATGATGCTGAAAACGCGAGCAACACGACCACCATCACCCCCACCACCTCCCCGACGACGACGAGAAACAAGAGGCGAGGGCGAGGTCCAAGTGCGGTGAGGCAACGCAAGGCGAGGCAAGGGCAAGGCGCAGTGAAGCAAGGGCGAGGGAAAAGTCGAGGCGAGGTCGAGGAGGAGGGCGTCGGCAGATCAAAATCATGTGTTGAACAAATTCAGCCCCCAACTTATGGGAACTTAATTACCATTCTCAGCATTGATGGAGGAGGTATTAGGGGCATTATTCCAGCTACCATTCTTGAATTCCTTGAATCTCAATTTCAGGAGTTAGATGGTGAAGATGCAAGACTTGCAGACTATTTTGATGTGATATCAGGAACAAGCACTGGAGGCCTTGTAACTGCAATGTTAACTGCTCCAGATCAAAATAATCGTCCCCTTTTTGCTGCTAAAGATATCAAACCATTTTACTTGGAGCACTGTCCAAAACTTTTCCCACAACCTAGAACATTACTGGCAAAGGTAATAAAATCATTGCTGGGAGGACCAAAGTATGATGGGAAATACTTGCATAAAGTGGTTAGAGAGAAGCTTGGAGACATTAGTTTAAATGAGACAATTACCAATGTTGTCATTCCCACTTTTGATATCAAATCCTTGCAACCAACTATATTCTCATCTTATCAGATTAAGAGTAGTCCTAGCTTGGATGCTAAATTATCCGATATATGCATTAGCACATCAGCTGCACCAACCTATCTCCCTGCTCATAACTTCACTACCAAAGATGCAAATGGAAATCCACATGAATTCAACCTCATCGATGGTGGTGTTTGTGCCAATAATCCGACATTAGTTGCGATGAATCAAGTGACAAAGCAAATTCTTGATGAAAATGTTGATTTCTTTCCAATCAAGGCTGCGGAATATCGTCGGTTTTTAATAATTTCAATAGGAACTGGGACAGCCAAAAATGAAGAAAAATTCAATGCAAAAATGGCAGCAAAATGGGGGCTTTTGGATTGGTTTATTCATAGTGGCTCCACTCCTTTAATTGATGTTTTCTCTCAATCAAGTGGTGATATGGCTGATTTTCATTTAGCTACTCTCACTCAAGCACTTCATTTAGAACACAATTATCTTCGAATTCAGGATGACACATTGACTGGAACTGATGCTTCAGTTGACATTTCCACCAAAAAAAATTTGGAGAGGCTTAGCCAAATTGGTGAAAATTTATTGAAGAAATCAGTCTCTAGGATTAATTTAGAGAATGGTAGGTTTGAGCCAATCAAAAATGGAGGAACAAATGAAGATGCACTCAAAAGGTTTGCCAAAATACTTTCGCAAGAGAGAAGTCTTCGTGACATGAGATCCCCACACACTAAAAAGACCCGTCACTAG 2001 0.4633 MSSDAREKRKRRSVEGEAAMANHIGGATAHCRGAVAAAQKNFIIDHHNLQPPFQYLLSTCLLSFLTTGRRPQTLSPSHSPSPPNSLTLADSLPKTRNVVAVFTRQERPVVAFFVASRALHRHLLCRVRSECRRRLRRSRSERCTVAVLVVAGASRRRRLCGSRSIAPSLFSEHRCSSPFLQFPFFVIHVIFGREEKGRRGDDAENASNTTTITPTTSPTTTRNKRRGRGPSAVRQRKARQGQGAVKQGRGKSRGEVEEEGVGRSKSCVEQIQPPTYGNLITILSIDGGGIRGIIPATILEFLESQFQELDGEDARLADYFDVISGTSTGGLVTAMLTAPDQNNRPLFAAKDIKPFYLEHCPKLFPQPRTLLAKVIKSLLGGPKYDGKYLHKVVREKLGDISLNETITNVVIPTFDIKSLQPTIFSSYQIKSSPSLDAKLSDICISTSAAPTYLPAHNFTTKDANGNPHEFNLIDGGVCANNPTLVAMNQVTKQILDENVDFFPIKAAEYRRFLIISIGTGTAKNEEKFNAKMAAKWGLLDWFIHSGSTPLIDVFSQSSGDMADFHLATLTQALHLEHNYLRIQDDTLTGTDASVDISTKKNLERLSQIGENLLKKSVSRINLENGRFEPIKNGGTNEDALKRFAKILSQERSLRDMRSPHTKKTRH 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03819 666 MobiDBLite consensus disorder prediction 197 266 - -
Aip06g03819 666 CDD Pat17_isozyme_like 277 625 - -
Aip06g03819 666 MobiDBLite consensus disorder prediction 250 264 - -
Aip06g03819 666 PANTHER XYLOSE ISOMERASE 263 663 - -
Aip06g03819 666 SUPERFAMILY FabD/lysophospholipase-like 279 624 IPR016035 -
Aip06g03819 666 PANTHER PATATIN 263 663 - -
Aip06g03819 666 MobiDBLite consensus disorder prediction 204 226 - -
Aip06g03819 666 Pfam Patatin-like phospholipase 283 487 IPR002641 GO:0006629
Aip06g03819 666 Gene3D Cytosolic phospholipase A2 catalytic domain 269 659 - -
Aip06g03819 666 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 283 487 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03819 Aip-Chr6 135896687 135906794 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03819 271 662 Miscellaneous Gene Families AT2G26560 64.557 0.0 525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03819 06 135896687 135906794 Aip06g03819 06 135896687 135906794 ECH