Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03809 ATGTCTGGTGGTACGAAGGGCGAACACCACCAAACGGTTCCCCTATCGGTGTTGTTGAAGCGCGAATTGGCGAGCGAGAAGATCGAGAAGCCAGAGATTGTTTCAGGCCAAGCAGGGCAGAGCAAGAAAGGGGAGGATTTCACCCTCATCAAAACTGAATGCCAGAGGGTGGTGGGGGATGGGGTCTCCACGTTTTCTGTTTTTGGGCTATTTGATGGACACAATGGAACTGCTGCTGCTATTTATTCTAAGGAGAATCTTCTAAATAATGTTTTAAGTGCGGTTCCTCCTGATCTTAACAGAGATGAGTGGGTAGCAGCATTGCCTAGGGCATTGGTTGCAGGCTTTGTAAAAACTGACAAAGATTTTCAGGACAAAGGACAAAAATCTGGAACCACTGTAACGTTTGTGATTATAGAAGGATGGGTTGTAACTGTTGCATCAGTTGGTGATTCACGTTGCGTGCTTGAATCTGGTGAAGGTGGGCTTTATTATTTGTCAGCAGATCATAGGCTAGAAACAAATGAAGAGGAGAGGGTCCGAATCACCTCTAGTGGGGGTGAGGTTGGTCGGCTAAACACCGGGGGAGGCACAGAGGTTGGGCCTTTAAGATGTTGGCCTGGTGGCTTGTGTCTTTCACGGTCAATTGGTGATATGGATATTGGTGAATTTATTGTCCCAGTGCCGTATGTAAAGCAAGTGAAGTTGTCCACCGCTGGAGGCAGGCTAGTTATCTGCAGTGATGGGGTCTGGGATTCTCTATCTGCAGAAGCAGTCTTGGATTCTTGTCGTGGCATGTCAGCGGAGACAGCAGCATCACATATTGTTAAAGACGCTGTAGAAGCAAAAGGACTTAGAGATGATACAACCTGCATCGTTGTTGATATATTACCGCATGAGAAGCCACCTGCTCCTGCACCACATCGAAAGAAGAAAGGAATAATGAAGTCCATGTTTCGTAAAAAGTCATCTGAGTCATCTTCTTATAACGAGAAAGACTACTTGGAGCCAGATGTGGTAGAGGAATTGTACGAAGAAGGATCTGCTATGCTTTCCGAGAGGTTAGATACAAAATATCCTCTCTGCAACATGTTCAAGTTGTTTATGTGTGCAGTGTGTCAAGTAGAGATAAAACCAGGGGAGGGTGTTTCAATATTTGAGGGTGCGCCCAACCCTCGTAAACTGCGTCCATGGGATGGACCTTTCCTCTGTACAAGTTGTCAAGATAAGAAAGAAGCCATGGAAGGGAAAAAAGCATCAGGTAGACATAGCAGTGGAAGTGATGATGATTAA 1293 0.4571 MSGGTKGEHHQTVPLSVLLKRELASEKIEKPEIVSGQAGQSKKGEDFTLIKTECQRVVGDGVSTFSVFGLFDGHNGTAAAIYSKENLLNNVLSAVPPDLNRDEWVAALPRALVAGFVKTDKDFQDKGQKSGTTVTFVIIEGWVVTVASVGDSRCVLESGEGGLYYLSADHRLETNEEERVRITSSGGEVGRLNTGGGTEVGPLRCWPGGLCLSRSIGDMDIGEFIVPVPYVKQVKLSTAGGRLVICSDGVWDSLSAEAVLDSCRGMSAETAASHIVKDAVEAKGLRDDTTCIVVDILPHEKPPAPAPHRKKKGIMKSMFRKKSSESSSYNEKDYLEPDVVEELYEEGSAMLSERLDTKYPLCNMFKLFMCAVCQVEIKPGEGVSIFEGAPNPRKLRPWDGPFLCTSCQDKKEAMEGKKASGRHSSGSDDD 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03809 430 ProSiteProfiles PPM-type phosphatase domain profile. 30 296 IPR001932 -
Aip06g03809 430 PANTHER ALPHABET, ISOFORM E-RELATED 8 424 - -
Aip06g03809 430 CDD PP2Cc 34 296 IPR001932 -
Aip06g03809 430 SMART PP2C_SIG_2 49 296 IPR001932 -
Aip06g03809 430 SMART PP2C_4 24 294 IPR001932 -
Aip06g03809 430 Gene3D - 33 302 IPR036457 -
Aip06g03809 430 Pfam Protein phosphatase 2C 57 281 IPR001932 -
Aip06g03809 430 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 8 424 - -
Aip06g03809 430 SUPERFAMILY PP2C-like 34 296 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03809 Aip-Chr6 135816775 135821964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03809 5 428 PP2C-type Phosphatase Gene Family AT1G47380 79.625 0.0 711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03809 06 135816775 135821964 Aip06g03809 06 135816775 135821964 ECH
Aip06g03809 06 135816775 135821964 Aip07g02684 07 110961114 110965256 PCT