Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03807 ATGCAAGCTGTGGAGAGGCTAGGGAGCTTTATCACCCGCGGAGTTTCGACTGTTTCAATGCCGTTCATCCCTTATGGTGGTGCTGTGGACATTGTTGTAGTTCAACAAAAAGATGGCAGCTTCAAGTCCTCTCCTTGGTTCGTTCGATTCGGGAAACTCCACAGGGTTCTCAAGGCTGATGAGAAGAAGGTTAGCATCAGTGTCAATGGATCCAAAGCCGGTTTCCACATGCACATGAACCATAAAGGGGAAGCCTTCTTTTTGAGGGATACACATTGTGAACCACAAGGGGATGAAGATTCCGGATCTAGCGAATCATCGTCGTCCGGCGAAGATGCTGATGTTGTCCTACCATGGGGCAGGAAGAGGAATTTCAAGTCAAAAAGTTGCAAGTTTGATCCGGATGGATCATTTGTAGCTGATATGAATGCCTTGAACAATGATAAGATTGTGAACAGGACTAATTCTCGCGGATCCCGGCTATTTAGGCTTGTGTTGGGGCAAAGGTCATTCAATGGGGAAGTTGATGAAGATGCAGAAGACTTATTAGAACGTGCTGAGATTGCAGCCAACCTTTTGGACCTCAAGTGGTCTACGAATCTGAAATTCGACCAGCTACCTCGTCGAGAAAGAAAGAACACTAGGGGTGGTACCTTGGAGAATGGTTTACATTCATCTAAGGTTGATGATTTGCATGCTCAGCAAAGGGATTGTTCTCATAGTGTCCTTGATATGTTTGATGTTGCGGACTTTGAAAAGCTACCTAAATTTCAAAAATCTCGCACCATTAGTGTATATCGGCCACATCGAAAAGCCAACAAGGTTAGGGCAGATACCCCAACATCTGAACAGCTAGCATCCTTGAATCTGCAGGAAGGAAGGAACTTGGTAACCTTTCGTTATTCTACAGCTATGTTGGGGACACAGCAGATTGATGCTCGGATATATTTGTGGAAATGGAACACCCGCATAGTGATATCGGATGTGGATGGAACAATTACAAGGTCTGATGTTCTAGGTCAGGTCATGCCTTTAGTCGGAATCGATTGGTCACAAACCGGTGTTGCACATTTATTCTCTGCTATCCAGGATAATGGATACCAACTACTTTTTCTTAGTGCTCGTGCAATTTCTCAAGCCTGTCACACCAGACGATTCCTATTCAACCTTAAACAGGATGGGAAAGTATTACCAGATGGTCCGGTCGTCATTTCCCCGGACGGACTTTTTCCTGCTCTGTATCGAGAAGTTATCCGGCGAGCTCCTCATGAATTCAAAATCGCATGCTTAGAGGAAATAAGGGCACTTTTCCCTCCTGATTGCAATCCATTCTATGCTGGTTTCGGAAATAGGGATACTGATGAACTCAGCTACCTTAAGGTTGGAATCCCTAAAGGAAAAATCTTCATAATCAATCCCAGGGGAGAGATTGCTGTAAATTGTTTCGACGCGCAATCATATCCTTCTCTTCATGCCGTTGTAGATGGAATATTCCCCCCGACAGACTCGTCTGAGCAGGAGGATTTCAATTCATGGAACTGTTTGCGGTTGCCCTCGGTGTCATAA 1566 0.4496 MQAVERLGSFITRGVSTVSMPFIPYGGAVDIVVVQQKDGSFKSSPWFVRFGKLHRVLKADEKKVSISVNGSKAGFHMHMNHKGEAFFLRDTHCEPQGDEDSGSSESSSSGEDADVVLPWGRKRNFKSKSCKFDPDGSFVADMNALNNDKIVNRTNSRGSRLFRLVLGQRSFNGEVDEDAEDLLERAEIAANLLDLKWSTNLKFDQLPRRERKNTRGGTLENGLHSSKVDDLHAQQRDCSHSVLDMFDVADFEKLPKFQKSRTISVYRPHRKANKVRADTPTSEQLASLNLQEGRNLVTFRYSTAMLGTQQIDARIYLWKWNTRIVISDVDGTITRSDVLGQVMPLVGIDWSQTGVAHLFSAIQDNGYQLLFLSARAISQACHTRRFLFNLKQDGKVLPDGPVVISPDGLFPALYREVIRRAPHEFKIACLEEIRALFPPDCNPFYAGFGNRDTDELSYLKVGIPKGKIFIINPRGEIAVNCFDAQSYPSLHAVVDGIFPPTDSSEQEDFNSWNCLRLPSVS 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03807 521 PANTHER LIPIN 1 212 IPR026058 -
Aip06g03807 521 PANTHER LIPIN 263 519 IPR026058 -
Aip06g03807 521 MobiDBLite consensus disorder prediction 92 113 - -
Aip06g03807 521 SMART lns2 324 480 IPR031315 -
Aip06g03807 521 Pfam LNS2 (Lipin/Ned1/Smp2) 279 499 IPR013209 -
Aip06g03807 521 PANTHER GH19076P 1 212 - -
Aip06g03807 521 PANTHER GH19076P 263 519 - -
Aip06g03807 521 Pfam lipin, N-terminal conserved region 1 94 IPR007651 -
Aip06g03807 521 SUPERFAMILY HAD-like 316 467 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03807 Aip-Chr6 135794482 135798820 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03807 06 135794482 135798820 Aip06g03807 06 135794482 135798820 ECH
Aip06g03807 06 135794482 135798820 Aip07g02686 07 110970479 110974664 PCT