Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03802 ATGCCATCACAAGGTAAGGCAGAAAAAGGCATAAAAATGAAAGCAGTGATGGAAGAGGCTCAAGTGAAAGCACCAAAGATGCCAAAGAAGAATGCAATGAAGATAGAGAAGCCAAGTTTCTTTGATCAAATTATGGGTAAAGGAGTGAAGAACATTGGCATGGTGAACTTTGATGAAGAAGAAGATGATGTTAGTGAATGGAACATGGAAGGTGAAAAAACAATCATCCCAATTCACTTTGAGAAGGTATCAACCCAATTCAATTGGACAGATTTGTTCCCCGAATGGATCGACGAAGAAGAAGAAAGCGATGTTCCATCTTGTCCAGATATTCCCATGCCGGATTTCAATGTGCATCAAAACATGGACATAATTGTGGCGAAGTTGCCATGCAACAATAATAAAGAAGGGTGGGGTAGGAATGTTTATAGGCTACAAGTTCATCTAATTGTGGCAAATTTGGCTGTGAAGAATAATAAGGGTAAGAGGGATTATGGGAAATTGAAGACTAAGGTTGTTTTTTTAAGCAAGTGTAGGCCAATGTTGGAAATTTTTAGGTGCAATGATTTGGTTAAGAATGATGGTGATTGGTGGTACTATGAGCCTGATTTGAAGAGATTGGAGCAAAAGGTTTCATTGCCTATTGGATCATGCAAGTTGGCTTTGCCTCTTTGGGAACAAGGGATTGACAAAGTGTATGACACGTCCAAGATTCAAAAAATGGTTAGAAAGAATGCAAAAACAAAACGTGAGGCGTACGCTACAGTGCTTCACTCCTCCGACGACTATGTGTGCGGCGCAATAATGCTGGCACAAAGCCTCCTCCGAACGGGAACCAAGCGTGACCTAATCCTCCTTCTCGACAACTCCATCTCTCCTGCAAAGCGTCGTGCGCTCTCCACCTCTGGGTGGAAGATCCGAATCATAACTCGGATCAGAAACCCAAAGGCGGAGAAACACTCCTACAACGAGTACAACTACAGTAAATTTCGGTTGTGGCAGTTAACAGACTATGACAAGGTTATTTTTATTGATGCTGACATTGTTGTTTTGAGGAACCTTGATGTTCTGTTTCATTTTCCGCAAATGTCGGCCACTGGGAATGATCAAAGTATATTTAATTCTGGGATTATGGTGATTGAGCCTTCAAATTGCACATTTAATGTGCTGATGGAGAGTAGATATGATATTGTTTCATATAATGGTGGTGACCAAGGCTTCCTTAACGAGATTTTTGTCTGGTGGCACAGGTTACCAAGGAGGGTGAACTACTTGAAGAATTTTTGGGCCAACACAACATTAGAAGCAAGCAAGAAGAACCATCTATTTGGAGCAGAGCCACCAAAGCTATACTCAATACACTACCTTGGATTAAAGCCATGGTATTGTTATAGGGACTATGATTGCAATTGGGACGTTGAGGACCAAAGGGTGTATGCTAGTGACGTGGCACATCATAAGTGGTGGAAGCTGCATGACCAAATGGACAAAAAGCTTCAACGCATGTGTAGGCTCACAAAACGACGTCGTACAAACCTCAATTGGGAGAGAAGAAAAGCTTCCAAATTAGGTTTGCCCGATCAACATTGGAAGATTAATATTACGGATCCCAGAAGATCTGGTTCACTTTTGATGAATTAA 1641 0.4144 MPSQGKAEKGIKMKAVMEEAQVKAPKMPKKNAMKIEKPSFFDQIMGKGVKNIGMVNFDEEEDDVSEWNMEGEKTIIPIHFEKVSTQFNWTDLFPEWIDEEEESDVPSCPDIPMPDFNVHQNMDIIVAKLPCNNNKEGWGRNVYRLQVHLIVANLAVKNNKGKRDYGKLKTKVVFLSKCRPMLEIFRCNDLVKNDGDWWYYEPDLKRLEQKVSLPIGSCKLALPLWEQGIDKVYDTSKIQKMVRKNAKTKREAYATVLHSSDDYVCGAIMLAQSLLRTGTKRDLILLLDNSISPAKRRALSTSGWKIRIITRIRNPKAEKHSYNEYNYSKFRLWQLTDYDKVIFIDADIVVLRNLDVLFHFPQMSATGNDQSIFNSGIMVIEPSNCTFNVLMESRYDIVSYNGGDQGFLNEIFVWWHRLPRRVNYLKNFWANTTLEASKKNHLFGAEPPKLYSIHYLGLKPWYCYRDYDCNWDVEDQRVYASDVAHHKWWKLHDQMDKKLQRMCRLTKRRRTNLNWERRKASKLGLPDQHWKINITDPRRSGSLLMN 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03802 546 Pfam Glycosyl transferase family 8 256 461 IPR002495 GO:0016757
Aip06g03802 546 CDD GT8_Glycogenin 251 495 - -
Aip06g03802 546 PANTHER GLYCOGENIN SUBFAMILY MEMBER 10 540 - -
Aip06g03802 546 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 249 500 IPR029044 -
Aip06g03802 546 SUPERFAMILY Nucleotide-diphospho-sugar transferases 253 501 IPR029044 -
Aip06g03802 546 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 2 10 540 IPR030519 GO:0005794|GO:0009834|GO:0015020|GO:0045492
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03802 Aip-Chr6 135767277 135772783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03802 13 545 Glycosyltransferase AT4G33330 64.991 0.0 712
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03802 06 135767277 135772783 Aip06g03802 06 135767277 135772783 ECH
Aip06g03802 06 135767277 135772783 Aip07g02691 07 111013991 111018178 PCT