Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03801 ATGGAGGGTGTTGAGGAGAATCTACCCTCATCAGAATCCTCTTCAGAAAGTGCTAATGAGCAAAAGCAGCAAAATGTAGAAACCCCTGGTGAAACTTCACATGTAAATGAATCCACTGTTAGTGATAGTAGAGAAGAATCCGAGACTCGTTTGCCGGTGACAACAGCCGAGGAATTAACCGAATCAGCAATGCTGCCTAATGCTTCTTCTGGTAGTCCAATTATTGTTGAAGAAATTGAAAATCCTCCCACAGATGACTCGGCATCATCGCCGCTGGATGATACTAAGCTTCACACAGCAGGATCAAATGATGATCAAATCATAGAACAAGATAATTCAGGTTCTACAGAGAATGCAGATTCTGAAGAGATCCTTGAGCAGCAGAAGAATGTTGAGACTGATGATTCAAATGATGTCCAAATCACAGAACAAGATGATTTAGCTTCTACAGCGAATGCAGATTCTGAAGAGATCCTTGAGAAGCAGGAGATTGTTAATAATGATGATCAAATCATAGAACAAGAAAATTCAGCTTCTATGGAGAATGCAGATTCTGAAGAGATCCTTGAGAAGCAGGAGGATGTTAATAATGATGATCAAATCATAGAACAAGATAGTTCTGCTTCTACAGCAAATGCAGATTCTGAAGAGATCCTTGAGAAGCAGGAGAATTTTCATAATGGTGATTCAAATGATCATCAAACGTTAGAACAAGATAATTCAGCTTCTACGGCAAATGCAGATTCTGAGGAGATCCTTGAGAGGCAAAAGAATGTTAATGATGAAGACTCAAAAGATAATCAAATCATAGAACAAGATAATTCAGCCTCTGCAGAAAATGCAGATTCTGAAGAGATCCTTGAGAAGCAGGAGAATGTTACTAATGATGATCCAAATGATGATCAAATCATAGAACAAGATAATTCAGCTTCTACGGCGATTGCAGATTCTGAAGAGATTCTTGAGAAGCAGGAGAATGTTAATGATGAAGATTCAAAAGATGATCAAATCATAGAACAAAATTCAGCTTCTACAGAAAACACAGGTTCTGAAGAGATCCTTGAGCAGCAGAAGAATGTTAATGATGAAGATTCAAAAGACGATCAAATCATAGAACAAAATTCAGCTTCTACAGAAAATACAGGTTCTGAAGAAATCCTTGAGCCGCAGAAGAATGTTAATGATGAAGACTCAAAAGATGATCAAATTATAGAGCAAGATAATTCAGCTTCTACAGAAAATCCAGGCTCTAAAGAGATCCTTGAGCAGCAGAAGAATGTTAATACCGATAATTCGAATGATGGCCAAATCATAGAACAAGAGAATTCAGCTTCTACAGAAAAAGCAAATTCTGAAGAGATCCTTGAGAATCAGAAGAATATTAACAATGATGAATCTAGTGTCACTACCATCGATGATCAAATGGAGATTCCAGCTTCTAATCCTGAAACAAAAGAGTTCCATGATGACAGTACCAAAGAAGTTATGTTATCATTGCCGCAAATCATAGTTACTGATTTTAGCAAGGAAAATTCAACACTGACGAGTTCAAATTCTTGTAATGCTATGGATACCATGAATGCTGATTCTGAACCGGAAGATTTCTATGATAGTAATCAAGGTGGTTCTGCCGTTAAAATTTCTTCCAGTATGGATGCAAATGACTTGATTAAACGGTCTACATCGGCACCGGAAATAAAATTGTTGCAGATGCTAAAGGAGAATAGAAGACGAAAGATGAACTCAACGGCTCGAAAAAAGGCTGATGTTGCTCATATACCAACCGGCTCGCCTTCAAGTTCCAAGAAAAATGCTGAGAATAGAGGCTTCATCGACACGGCAGCTCCCTTCGAATCTGTAAAGGAAGCTGTTTCCAAGTTCGGAGGAATTGTAGATTGGAAGGCTCATAAGAAACAGACCGTGGAGAGACGAAAGGACGTAGAACAAGAACTCGAGAAAGTGCAGCAGGAGATCCCAATATACAAAAAGAAATCAGAAGCTGCAGAGAAAGCGAAACAAGAAGTACTTCAGGAGCTGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTCGGAACTCGCGAAACTCAGAGTGGAAGAGATGGAGCAAGGTATCGCCGAGGACTCTAGCGTGGCGGCCAAGGCACAGCTTGAGGTCGCAAAGGCCAGGTACACTGCGGCAGTTACAGAGCTAACATCTGTGAAAGAGGAGCTGGACGCGTTGCGTAAGGAATACGCTTCCTTAGTTGTTGAAAAAGAGGAAGCTATTCAGAAATCGGAAGAAGCAATTACTTCGTCCAAACAGGTTGAGAAGACTGTGGAAGAATTAACGATTGAGTTGCTTGCTATAAAGGAGTCGATGGAAGCAGCACATGCAGCGCACATGGAAGCCGAAGAACATCGGATGGAATCGGTTATGGCTAGGGATCAGGACTCTCTCAATTGGGAAAAAGATCTTAAACACTCCGAGGAAGAACTTCAAAGAATAAACCAGAAAATCTTAGCTGCTAAAGATCTGAAGTCTAAATTGGACACAGCCTCGACTTTGCTGACGGATCTGAAAGATGAAATGAATGCTTATACAGAAGCACAGTCGAGGCAAGACGGAAGTGCCGAACGTGAAGAACTGTGGCCTTTGAGGACGAAGATACACAATGAAATAAAAGAAGCCGTTGAATCTGCGAAGAAGGAACTTGCGGAAGTGAAAAGTAACATAGAAAAAGCAACTGCTGAGGTTAGTAACTTAAAGGAAGCCGCAGCGGCGTTGAAAACAGAACTTGAGGAAGAGAAATTGAACCTTGCATCGATTCGGCAGAAAGAGGAAATGGCCTCAATCACTGCGAAATCTCTAGAAGCTGAAGTAGAGAAAAGCAGAACAGAAAAGCTTCTGCTTCAGATGAAAGAAAGGGAAGCTAGAATCCCGCAGAAAGTACGAGAAGCTGCTGAAGAGGCTAAAGAAGCCAACTCACTCAGTCAAGCAGCTCGCGAAGAGCTGCAGCGAGCGAAGGAGGAGGCCGAGCAAGCGAAGGCGGCAGCGAGCGCAATGCAGAGCAGATTACTTGAAGTTCTAAAGGAGATTGAGGCTGCCAAGACTTCGGAGAGATGCGCAATGGCGGCAATCAATGCATTGAAGGAGAGTGAATTAGCTCAAAGCAGCCAAGAAGCAGATTCGTCGGCGGAGGTAGTGACACTTTCTTTGGAGGAGTATTACTTGCTGAGCAAGCATGCACATGAGGCTGAAGAGGGAGCCAAGGCAGTGATGGCGACGGCGAATGCTGAAATTGAGGCAGCTAAGGAATCTGAAATGACAAGTTTGGAAAAGTTGAATGAAGTGAATACAGAGATTGCTGCTAGAAGAGAAACTTTAAGGGATGCAATGTGTAAAGCTGAGAAGGCTAAAGAAGGAAAGTTAGGCATGGAATACGAGTTGCGAAGATGGAGGTCGGAGCGCGACAGAGGGGAACACCAGAAAAGCATGTCCGGGGACAGTTTTGATTCAGGTTCAAGGGGTTATGACAGTGCAATTGGATCACCAGATTTAAGAAATGGAAAGAAGAAGAAGAAGTCATTTTTTCCAAGGTTTTTGATGTTCTTTGCAAGAAGAAAATCATATTCGTCACATCACTGTAGTCCCTATTGA 3792 0.3985 MEGVEENLPSSESSSESANEQKQQNVETPGETSHVNESTVSDSREESETRLPVTTAEELTESAMLPNASSGSPIIVEEIENPPTDDSASSPLDDTKLHTAGSNDDQIIEQDNSGSTENADSEEILEQQKNVETDDSNDVQITEQDDLASTANADSEEILEKQEIVNNDDQIIEQENSASMENADSEEILEKQEDVNNDDQIIEQDSSASTANADSEEILEKQENFHNGDSNDHQTLEQDNSASTANADSEEILERQKNVNDEDSKDNQIIEQDNSASAENADSEEILEKQENVTNDDPNDDQIIEQDNSASTAIADSEEILEKQENVNDEDSKDDQIIEQNSASTENTGSEEILEQQKNVNDEDSKDDQIIEQNSASTENTGSEEILEPQKNVNDEDSKDDQIIEQDNSASTENPGSKEILEQQKNVNTDNSNDGQIIEQENSASTEKANSEEILENQKNINNDESSVTTIDDQMEIPASNPETKEFHDDSTKEVMLSLPQIIVTDFSKENSTLTSSNSCNAMDTMNADSEPEDFYDSNQGGSAVKISSSMDANDLIKRSTSAPEIKLLQMLKENRRRKMNSTARKKADVAHIPTGSPSSSKKNAENRGFIDTAAPFESVKEAVSKFGGIVDWKAHKKQTVERRKDVEQELEKVQQEIPIYKKKSEAAEKAKQEVLQELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSELAKLRVEEMEQGIAEDSSVAAKAQLEVAKARYTAAVTELTSVKEELDALRKEYASLVVEKEEAIQKSEEAITSSKQVEKTVEELTIELLAIKESMEAAHAAHMEAEEHRMESVMARDQDSLNWEKDLKHSEEELQRINQKILAAKDLKSKLDTASTLLTDLKDEMNAYTEAQSRQDGSAEREELWPLRTKIHNEIKEAVESAKKELAEVKSNIEKATAEVSNLKEAAAALKTELEEEKLNLASIRQKEEMASITAKSLEAEVEKSRTEKLLLQMKEREARIPQKVREAAEEAKEANSLSQAAREELQRAKEEAEQAKAAASAMQSRLLEVLKEIEAAKTSERCAMAAINALKESELAQSSQEADSSAEVVTLSLEEYYLLSKHAHEAEEGAKAVMATANAEIEAAKESEMTSLEKLNEVNTEIAARRETLRDAMCKAEKAKEGKLGMEYELRRWRSERDRGEHQKSMSGDSFDSGSRGYDSAIGSPDLRNGKKKKKSFFPRFLMFFARRKSYSSHHCSPY 1263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03801 1263 Coils Coil 998 1018 - -
Aip06g03801 1263 MobiDBLite consensus disorder prediction 282 296 - -
Aip06g03801 1263 MobiDBLite consensus disorder prediction 134 151 - -
Aip06g03801 1263 Coils Coil 775 809 - -
Aip06g03801 1263 MobiDBLite consensus disorder prediction 7 37 - -
Aip06g03801 1263 MobiDBLite consensus disorder prediction 250 269 - -
Aip06g03801 1263 PANTHER WEB FAMILY PROTEIN-RELATED 1226 1255 - -
Aip06g03801 1263 PANTHER WEB FAMILY PROTEIN-RELATED 582 680 - -
Aip06g03801 1263 MobiDBLite consensus disorder prediction 1 486 - -
Aip06g03801 1263 MobiDBLite consensus disorder prediction 1199 1236 - -
Aip06g03801 1263 MobiDBLite consensus disorder prediction 371 388 - -
Aip06g03801 1263 MobiDBLite consensus disorder prediction 83 121 - -
Aip06g03801 1263 MobiDBLite consensus disorder prediction 216 233 - -
Aip06g03801 1263 Coils Coil 741 750 - -
Aip06g03801 1263 MobiDBLite consensus disorder prediction 184 198 - -
Aip06g03801 1263 Coils Coil 863 914 - -
Aip06g03801 1263 MobiDBLite consensus disorder prediction 234 249 - -
Aip06g03801 1263 MobiDBLite consensus disorder prediction 407 477 - -
Aip06g03801 1263 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 582 680 - -
Aip06g03801 1263 MobiDBLite consensus disorder prediction 318 337 - -
Aip06g03801 1263 PANTHER WEB FAMILY PROTEIN-RELATED 740 1203 - -
Aip06g03801 1263 MobiDBLite consensus disorder prediction 584 608 - -
Aip06g03801 1263 MobiDBLite consensus disorder prediction 169 183 - -
Aip06g03801 1263 Coils Coil 935 990 - -
Aip06g03801 1263 Coils Coil 1028 1069 - -
Aip06g03801 1263 MobiDBLite consensus disorder prediction 518 542 - -
Aip06g03801 1263 Pfam Weak chloroplast movement under blue light 608 680 IPR008545 -
Aip06g03801 1263 Pfam Weak chloroplast movement under blue light 740 1202 IPR008545 -
Aip06g03801 1263 MobiDBLite consensus disorder prediction 356 370 - -
Aip06g03801 1263 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 1226 1255 - -
Aip06g03801 1263 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 740 1203 - -
Aip06g03801 1263 Coils Coil 637 679 - -
Aip06g03801 1263 Coils Coil 1156 1176 - -
Aip06g03801 1263 MobiDBLite consensus disorder prediction 338 355 - -
Aip06g03801 1263 MobiDBLite consensus disorder prediction 53 69 - -
Aip06g03801 1263 MobiDBLite consensus disorder prediction 1030 1057 - -
Aip06g03801 1263 MobiDBLite consensus disorder prediction 38 52 - -
Aip06g03801 1263 MobiDBLite consensus disorder prediction 201 215 - -
Aip06g03801 1263 MobiDBLite consensus disorder prediction 389 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03801 Aip-Chr6 135741989 135746557 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03801 06 135741989 135746557 Aip06g03801 06 135741989 135746557 ECH
Aip06g03801 06 135741989 135746557 Aip07g02692 07 111020931 111025594 PCT