Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03785 ATGGTTACGGAAGGACCCGCCATCGAAGCTCTCGGTTCTCTCTTCAAAATCACACAAGTCTTTCTATGGGATGATGGTTCTCCGGGTTCTCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCACTGTCATCTGAATATTTATCTAAATCGGCTGAAGTTCATGGCAATGGCAATGACAATGACAATGACAATGAAAATGACAGCTCGAACCTTGTTCCTGATTGGAGCGACCTTCTCGAACCTGAGGATTTGGAACTTAACAAACAGATGAGTGAATTGGGTCTCCCTCTTTCCTTTCACACAACCAAAGAGAAAAGTGGACCAGGGAAAGGTAAAAAGAAGGGTTCACGTTCAAAGCTTCGGCGTACTTGTCATACTGCAGAGGAGGTTGTATCTGCTGCTGAATTTCATGATAAGGCAAGCAGTTCTGTATCTTGTATATCGATGCTGGGCCAAAGTGAATCATCTTACTGCAGTGTAGTGGAGATTGATATGACTCGATGTGCCTCTGTTGAAGGAGATAATTCAGCATGCTGCACTGCAGAGAAACATGATGAAGATATAATTGAGGCAGCAACTAATGAAACCCCAGATAGTGACTCTCTAATCAACAATACATGTGTTGATTTAAAAATTCCACCAGCTTTGGCCACCGGAGTCTCTGCTGGAAGCCACTTGACAAGTCCTAGCGCCAATTATTGTGGGATAAAACACAATGAAAGCTTAATTGATGTTGAATGTTTAGAAATTTCACCAATTGTTAGCAAAGAGACGACCGAGAGTGAGACCATTTGCAATGATGATGATGCTGGCACTTGGCATCCACCAACTAATGAATCAGAATTGGTTACCATGAGTATAGAAGGGACTGGATGTGGCCAAATCAACATGTCAAATTATCTTGGCGAACTCGGAGATTGGATGGTGTTTTGGGATACTTTCTACATGAGAAAATACTTCTATAATACCACAACACAGACTTCTACATGGGACCCACCCCAAGGGATGGAGCATCTAGCAATTGTTGAGTCTATTGAATTAGTCGATGGCGGGGCTTTAAAGGAAGCAGAGGAGTGCAAAACACAAAATAACACTAAAGCACCCCATGAAACCTTGATTGCAGAGGAGTCAGAAGGAAAACAACATGATGAGTATTCAACTAGTATCGAAGTTGGTGGGAAGTTGGTTTCCGATCTCACTACACATAGCGAGGACCAATTGGTGGATCATTCTGATGAGTATCTTGAGAGAAGTAGTTGCAACGGTAGAGTTTCATGCTCCTCAGTATCAAATGCCATGGAGCACACAATTAGTTCCAATGAAGGAAACATACAGGCAGCATCAGAGGTTAATTATAAACACTTAGAAAACATGGTTATTGATACACCTGAATATACTGAGTTTGATCCATCCACGTCAAAAGAGGGCAATAAAGTGAAAAGGAGACATAGGCAGAGAAGAAAATCCTATAGTGAAACTGAAGTTCAATTTCAAGAAATGCCTGAAGAGTATCCTGCTGCAATTGGCAAATATTGGTGGCAGAGATATATTTTGTTCTCTAGATTTGATGATGGTGTAAAAATGGATGAGGAAGGATGGTTTTCTGTCACTCCGGAGCCTATTGCTCGACATCAAGCAGAGCGTTGTGCTAGTGGCATTATAATTGACTGTTTTGTTGGCGTTGGTGGGAATGCTATCCAATTTGTGAAGAGTTGCAATCATGTGATAGCGATTGATATTGATCCGCTGAAGATTGATTATGCTAGGCACAATGCTGCCATTTATGGGGTGGATGATCAAATTAACTTCATAATCGGTGACTTCTTTGTCTTGGCACCTAAGTTAAAGGCCGATATGGTTTTCTTGTCTCCACCTTGGGGAGGACCTGATTATTTAAAGGTTGCGACTTATGACATGAAGACAATGCTTAAACCGCATGATGGATTTACTCTGTTCAATCTTGCGAAGGAGATTGCTTCCAAAGTTGTAATGTTCCTTCCAAGAAATGTAGATTTCAATCAATTGGCAGAGTTATCTCTATCTGCCAATCCACCATGGTCACTGGAGGTGGAGAAAGTTCACTTAAATGGAAAACTGAAGGCGATCACTGCGTATTTCAGCGACACAAGAGTTGGAGGTTGCTCGGTGAATAAACACATACGCTTCTGCTCAAGCTCAAGTGATGAAGAATCAGGATCCCTGCAATGA 2211 0.412 MVTEGPAIEALGSLFKITQVFLWDDGSPGSLXXXXXXXXXXSLSSEYLSKSAEVHGNGNDNDNDNENDSSNLVPDWSDLLEPEDLELNKQMSELGLPLSFHTTKEKSGPGKGKKKGSRSKLRRTCHTAEEVVSAAEFHDKASSSVSCISMLGQSESSYCSVVEIDMTRCASVEGDNSACCTAEKHDEDIIEAATNETPDSDSLINNTCVDLKIPPALATGVSAGSHLTSPSANYCGIKHNESLIDVECLEISPIVSKETTESETICNDDDAGTWHPPTNESELVTMSIEGTGCGQINMSNYLGELGDWMVFWDTFYMRKYFYNTTTQTSTWDPPQGMEHLAIVESIELVDGGALKEAEECKTQNNTKAPHETLIAEESEGKQHDEYSTSIEVGGKLVSDLTTHSEDQLVDHSDEYLERSSCNGRVSCSSVSNAMEHTISSNEGNIQAASEVNYKHLENMVIDTPEYTEFDPSTSKEGNKVKRRHRQRRKSYSETEVQFQEMPEEYPAAIGKYWWQRYILFSRFDDGVKMDEEGWFSVTPEPIARHQAERCASGIIIDCFVGVGGNAIQFVKSCNHVIAIDIDPLKIDYARHNAAIYGVDDQINFIIGDFFVLAPKLKADMVFLSPPWGGPDYLKVATYDMKTMLKPHDGFTLFNLAKEIASKVVMFLPRNVDFNQLAELSLSANPPWSLEVEKVHLNGKLKAITAYFSDTRVGGCSVNKHIRFCSSSSDEESGSLQ 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03785 736 SUPERFAMILY WW domain 298 336 IPR036020 GO:0005515
Aip06g03785 736 CDD WW 306 336 IPR001202 GO:0005515
Aip06g03785 736 ProSitePatterns WW/rsp5/WWP domain signature. 308 334 IPR001202 GO:0005515
Aip06g03785 736 MobiDBLite consensus disorder prediction 466 488 - -
Aip06g03785 736 Gene3D Vaccinia Virus protein VP39 503 712 IPR029063 -
Aip06g03785 736 PANTHER S-ADENOSYLMETHIONINE-DEPENDENT METHYLTRANSFERASE RELATED 92 710 - -
Aip06g03785 736 MobiDBLite consensus disorder prediction 48 122 - -
Aip06g03785 736 Pfam RNA cap guanine-N2 methyltransferase 554 708 IPR019012 GO:0001510|GO:0008168|GO:0009452
Aip06g03785 736 ProSiteProfiles WW/rsp5/WWP domain profile. 308 336 IPR001202 GO:0005515
Aip06g03785 736 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 521 644 IPR029063 -
Aip06g03785 736 SMART ww_5 303 336 IPR001202 GO:0005515
Aip06g03785 736 Gene3D - 299 349 - -
Aip06g03785 736 CDD AdoMet_MTases 555 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03785 Aip-Chr6 135610672 135615009 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03785 06 135610672 135615009 Aip06g03785 06 135610672 135615009 ECH