Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03767 ATGGTGAAGAACAACCAAGGAATCTACACCCCTAAGCACCCCAAAGTAGTCGTCCTCTGGGACCTCGACAACAAGCCCCCACGAGGACCCCCATACGACGCCGCACGCTCCCTCACGCGCCTCGCAACTCACCTCGGCAACGTCGTCGACATCTCCGCCTACGCCAATCGCCACACATTCATCCACCTCCCGCAGTGGGTCCTACAGGATCGCCGGCAGAGAAAGCACCTCGACGTGCTGGAACGGAAGGGCCTGGTGGTGCCGTCAGAGCCCTACAGGTGTTCCGTCTGCGGGAGAAAATGTCGCACCAATCTGGATCTGAAGAAGCATTTCAGGCAGTTGCATGAACGAGAGAGGCAGAAGAAGCTTAATCGGATGAAATCCTTGAAAGGGAAGAAACGGCAGCGTTTTAAAGAGAGGTTTATTCAGGGGAATGAAAAGTATAATGAGGCTGCTAGGTCTCTCATCAGGCCCAAGATTGGTTATGGGCTAGCTTCAGAGCTGAGGAGGGCTGGGGTATATGTGAAGACTGTGGAGGATAAGCCTCAGGCTGCAGATTGGGCATTGAAGAGGCAGATGCAGCACTCAATGACCAGGGGGATTGATTGGCTGGTTTTGGTTTCAGATGATTCGGATTTCGCAGAGATGTTGAGGAGAGCAAGAGAGAGGGAATTGGGGACAGTGGTCGTTGGGGATTGGGATAGGGCACTGGGGAGGCACGCCGATTTGTGGTTTCCTTGGATTGATGTTGAGAATGGGAATGTCTCGGAGAAGGATCTGGTGATCGAGAACAGCAGGAGTAGGGCTCGAAGGGACGGTTTTGTCGTGGAAGAAGAAGATGATGATGGGTTTTTTTCATTGTCGAGATTTGACAGTGGTGGTGGTCATGGGAGTAGTGATTTGGATGAGCTTGTAGATGAACTTGCAGCAGCGAGGACTGATTTTACTGCGGCAATTTCAGAGGAGGATGAAGACGATTATCTGTTGGGGAGTAGTGAGGATGAATACATAGAAGATTATGATGAAGACAGTGATCAAGAAGATGATGGGTTCTATTGA 1059 0.5118 MVKNNQGIYTPKHPKVVVLWDLDNKPPRGPPYDAARSLTRLATHLGNVVDISAYANRHTFIHLPQWVLQDRRQRKHLDVLERKGLVVPSEPYRCSVCGRKCRTNLDLKKHFRQLHERERQKKLNRMKSLKGKKRQRFKERFIQGNEKYNEAARSLIRPKIGYGLASELRRAGVYVKTVEDKPQAADWALKRQMQHSMTRGIDWLVLVSDDSDFAEMLRRARERELGTVVVGDWDRALGRHADLWFPWIDVENGNVSEKDLVIENSRSRARRDGFVVEEEDDDGFFSLSRFDSGGGHGSSDLDELVDELAAARTDFTAAISEEDEDDYLLGSSEDEYIEDYDEDSDQEDDGFY 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03767 352 ProSiteProfiles Zinc finger C2H2 type domain profile. 92 120 IPR013087 -
Aip06g03767 352 PANTHER - 1 308 - -
Aip06g03767 352 MobiDBLite consensus disorder prediction 322 352 - -
Aip06g03767 352 ProSitePatterns Zinc finger C2H2 type domain signature. 94 115 IPR013087 -
Aip06g03767 352 CDD PIN_LabA-like 102 232 - -
Aip06g03767 352 Coils Coil 112 132 - -
Aip06g03767 352 Gene3D - 9 249 - -
Aip06g03767 352 SMART c2h2final6 92 115 IPR013087 -
Aip06g03767 352 PANTHER OS06G0166200 PROTEIN 1 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03767 Aip-Chr6 135398117 135399758 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03767 1 288 C2H2 Transcription Factor Family AT5G52010 71.379 2.57e-152 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aip06g03767 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03767 06 135398117 135399758 Aip06g03767 06 135398117 135399758 ECH