Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03754 ATGATGAGTATCCACTCACAAAAATTCTCAACCTCAAGAACTTTGTACAATCTCTTATTGTTAATGTCCCTTCTTTCTATTATCCACACATCAGCACTACACAACACAAAAAACAAAGGCCACGGAAACAAAAGTGTTGCCAAATCAGTTCCAATTGTAGCAGCATCATCTCCAATTTCTCCACCTCTAGTGTTTGCAGATCAAAGGCTTCAATTAGTGTATCCAGTGATCCAAAAATTCAAGTCCACCGTAACCTTAGATCCCTTAGGAGTTACAAAAACTTGGGTAGGTTCAGATATTTGTAGCTACAAAGGTTTCTATTGTGACACTCCACCATACAATAGTTCAGCCGTTGCCTTAGCCTCAATTGATTTCAACGGTTTTCAACTTGTTGCACCTACCCTTGATGGATTCATAGATCAATTACCTGATATTGCTCTGTTCCATGCAAATACCAACAATTTTAGTGGAACAATCACACCCCAGATTTCAAAATTACCTTATCTTTATGAGCTTGATCTTAGTAACAATCAATTATCAGGTCCATTTCCTCTGGCTGTTCTGGGAATGGAAACGTTAACGTTTTTGGACATTAGGTTCAATTTGTTCTCTGGGGCAGTTCCACCACAGATTTTCACACAGAATCTTCAAGTTTTGTTCATCAACAACAACATATTTAATCAGAGTTTGCCTGATAACTTAGGATCCACTCATATTTTGTTGCTAACCTTAGCAAACAACAAGTTCAATGGTCCAATTCCAACAAGTCTTCCAAAGGCTTTAGCCACACTCACTGAAGTGTTGCTATTGAACAACCAGCTAACAGGTTGTTTGCCTTATGAGATTGGTTACCTTCAAGAGGCAACGGTTTTTGACGTTGGGAATAACCAATTGACAGGTCCGTTGCCATTGTCATTGAGTTGTCTTGAGAAGGTTGAGGTTCTGAATTTTGGTGGGAATTTGTTGTATGGTATGGTGCCTGAAGTTGTGTGTGCAAGTTTGATGGGCAATTTGGTAAATTTCTCACTTTCAGATAACTATTTCAATGCTGTGGGACCCATTTGTAGGGTTTTGATTGAGAGAGGAGTTCTTGATGTTACAAAGAATTGCATTCCTGATCTTCCATTCCAGAGATCAATTCTTGAGTGTGCTCAATTCTTTGCACAACCAAGGATGTGTCCATTGATGTGGTATCATAGTTTCATCCCTTGCAAGCTTCATTTTCATAACACTCCACTTTCTTCTATACCCTAG 1254 0.3892 MMSIHSQKFSTSRTLYNLLLLMSLLSIIHTSALHNTKNKGHGNKSVAKSVPIVAASSPISPPLVFADQRLQLVYPVIQKFKSTVTLDPLGVTKTWVGSDICSYKGFYCDTPPYNSSAVALASIDFNGFQLVAPTLDGFIDQLPDIALFHANTNNFSGTITPQISKLPYLYELDLSNNQLSGPFPLAVLGMETLTFLDIRFNLFSGAVPPQIFTQNLQVLFINNNIFNQSLPDNLGSTHILLLTLANNKFNGPIPTSLPKALATLTEVLLLNNQLTGCLPYEIGYLQEATVFDVGNNQLTGPLPLSLSCLEKVEVLNFGGNLLYGMVPEVVCASLMGNLVNFSLSDNYFNAVGPICRVLIERGVLDVTKNCIPDLPFQRSILECAQFFAQPRMCPLMWYHSFIPCKLHFHNTPLSSIP 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03754 417 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 22 414 - -
Aip06g03754 417 SUPERFAMILY L domain-like 86 371 - -
Aip06g03754 417 Gene3D Ribonuclease Inhibitor 75 237 IPR032675 -
Aip06g03754 417 PANTHER BNAA09G53810D PROTEIN 22 414 - -
Aip06g03754 417 Gene3D Ribonuclease Inhibitor 242 385 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03754 Aip-Chr6 135199151 135200631 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03754 59 390 Leucine-rich Repeat extension Gene Families AT3G24480 41.566 6.73e-85 266
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03754 06 135199151 135200631 Aip06g03754 06 135199151 135200631 ECH