Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03745 ATGGCACATCATCATCATCATCAACACCACACAGATTCTTTGTACTGCTCAGAACAACATTATTTTGATGATGAGGAACATGATCATGTGTTTCTAGAACAAGACATGTTTTGTGATGATTCAGAGTTGAAAACTCTTGTTTCAAAAGAACAAGAACAAGAGAAGAAACTCAGCATCATTCTTTGCATTGATGAGTGGGAAAGAAGAGAAGCAGTTGAATGGATTCTTAGAGTGAATGCATATTTCTCATTCTCTGCTCTCACAGCTTCTCTTGCTGTTAACTACCTTCACAGATTCCTCTTCACCTTCACCATGAAGAAGCAGCAGCCATGGTTGACTCATCTTGCTGCAGTTGCTTGCATCTCTCTTGCTGCTAAAATGGAAGAGACCCAAGTTCCTCTTCCTCTTGATTTACAAGTGGAGGACAGCAAATATGTGTTTGAGGCAAAAACAATAAAGAAAATGGAGATTTTGGTACTTTCAACTCTTGAGTGGAAGATGAATCCACCAACACCTCTCTCTTTCATTGATTACATCACAAGAAGACTTAAATGTTTTCACTTCCTCAACACATGTCAGTCTCTTCTTCTTTCTCTCTTACCAGATTCCAGGCTTATTGGCTATCTTCCTTCTGTGTTGGCAACTGCTACAATGATGCATGTAGTTAACAACAATGTGGAGCCTTATCTTGCATCTGAATACCAAAATCAGTTCTTGGGTATTCTTGAAATCAACAAGGAGAAGTTAGAAGAATGCTACAATCTCATATTGGAGGTTGTATCAGAGTCAGGATTCAACTACAAAGAATCCAAAAAACGCAATTTTGGATCAATTATTATTCCTAGTAGCCCAAGTGGTGTAATTGATGTGTCATTTAGCTTTGATCATCATGATAGCTCTAATGATTCATGGGAAGTAGTATCTGCTAATGATTCTGTTTCATCAACACCAAACAGCATCAACAAGAAGAGGCCTAGGACTCAAGAACACACTGCTTCCTTTGAACAATTCAAGCAATGA 1020 0.3833 MAHHHHHQHHTDSLYCSEQHYFDDEEHDHVFLEQDMFCDDSELKTLVSKEQEQEKKLSIILCIDEWERREAVEWILRVNAYFSFSALTASLAVNYLHRFLFTFTMKKQQPWLTHLAAVACISLAAKMEETQVPLPLDLQVEDSKYVFEAKTIKKMEILVLSTLEWKMNPPTPLSFIDYITRRLKCFHFLNTCQSLLLSLLPDSRLIGYLPSVLATATMMHVVNNNVEPYLASEYQNQFLGILEINKEKLEECYNLILEVVSESGFNYKESKKRNFGSIIIPSSPSGVIDVSFSFDHHDSSNDSWEVVSANDSVSSTPNSINKKRPRTQEHTASFEQFKQ 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03745 339 PANTHER CYCLIN D3.1 PROTEIN 29 323 - -
Aip06g03745 339 CDD CYCLIN 68 160 IPR013763 -
Aip06g03745 339 SMART cyclin_7 73 161 IPR013763 -
Aip06g03745 339 SUPERFAMILY Cyclin-like 152 261 IPR036915 -
Aip06g03745 339 Pfam Cyclin, N-terminal domain 47 168 IPR006671 -
Aip06g03745 339 SUPERFAMILY Cyclin-like 40 168 IPR036915 -
Aip06g03745 339 SMART Cyclin_C_2 170 283 IPR004367 -
Aip06g03745 339 MobiDBLite consensus disorder prediction 305 322 - -
Aip06g03745 339 Gene3D - 56 168 - -
Aip06g03745 339 Pfam Cyclin, C-terminal domain 170 268 IPR004367 -
Aip06g03745 339 PANTHER CYCLINS 29 323 IPR039361 -
Aip06g03745 339 MobiDBLite consensus disorder prediction 305 339 - -
Aip06g03745 339 Gene3D - 43 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03745 Aip-Chr6 135099957 135103313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03745 12 274 Core Cell Cycle Gene Families AT4G34160 48.084 6.63e-86 262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03745 06 135099957 135103313 Aip05g00605 05 7432013 7437504 ECH
Aip06g03745 06 135099957 135103313 Aip01g01008 01 20627570 20629074 ECH
Aip06g03745 06 135099957 135103313 Aip09g03744 09 144269401 144271394 ECH
Aip06g03745 06 135099957 135103313 Aip06g03745 06 135099957 135103313 ECH
Aip06g03745 06 135099957 135103313 Aip07g03542 07 125459191 125469325 PCT