Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03737 ATGGCCCACCAAGAGAACCCCACGCGCCCTCAGCGCGAGGCCAAAAAGAGGGCAGCAGCTGCACTCTCCGAGCTCCAAACCGGCGCGTCCAAGAAGAAGCGCGTCGTGTTGGGCGAACTCACTAACATCAGCAACCCCAGCGTTGCACCACCACAACCACAACAACCTGCCAAGNNNNNNNNNNNNNNNNNNNNNNNNCCGGTTCTCGGTAACCGCCGGTTTAGTCAGAACGAGGAGAAAATAAAAACCACCACTACCAGGGGAAAGAAGAGAACGGTCGGGAAAAACCAGAAACCGGCGGTGACTCCACCGGAAACTGTTGACGCCGCAAAGAAGCCGGAAGTTACTGTTGATCCGCAATTATGTGCTCCTTATGTTTCTGATATCTACGATTATCTTCGTAAAATGGAGGAAGATCCAAGTAAGAGGCCATTACCGGATTATGTGCAGAAAGTGCAGAGGCATGTGAATGCAAACATGAGGGGTGTTCTTGTGGATTGGTTAGTAGAGGTTGCCGAGGAGTATAAGCTTGTTTCCGATACCCTTTACTTCTCAGTTTCGTACATTGACAGATACTTGTCTTTGACTGCCTTATCAAGTCAAAAGCTGCAGTTGCTTGGTGTTTCGGCAATGCTTATTGCATCAAAATATGAGGAGATAAAGCCACCTGAAGTGGAAGAATTTTGTTACATTACAGACAACACATACACCAAGGATCAGGTTGTGGAGATGGAAGCTGATATATTGAAGTCTTTGAAGTTTGAATTGGGTGGTCCAACAGTAAAGACCTTTCTAAGAAGATTCTCTAAAGTTGCTCAAGAGAGCAAAGATACATCAGACTTGCAATTTGAGTTTCTCACTAGCTACCTCGCAGAGCTCAGTTTGTTGGATTATAATTGTGTGAAATTCTTGCCTTCTTTGGTGGCAGCATCTGTTGTATTTCTAGCAAGATTTATGCTAAGCCCAAAGACACATCCTTGGAATGCAGCACTTTATCAACTCACTAGATATAAACCTGCCGAATTGAAGGAATGTGCTCAAAATATACATGATCTGTACCTCAGCAGGAGAGGTGGCTCTTTGCAAGCTGTGAGAGAGAAATACAAACAACATAAGTTCAAATGCGTGGCCACAACTCCATCACCTCCAGAGATTCCCGTTTCTTATTTTGAATTTAGAGTGGCAGATCCATAG 1194 0.443 MAHQENPTRPQREAKKRAAAALSELQTGASKKKRVVLGELTNISNPSVAPPQPQQPAKXXXXXXXXPVLGNRRFSQNEEKIKTTTTRGKKRTVGKNQKPAVTPPETVDAAKKPEVTVDPQLCAPYVSDIYDYLRKMEEDPSKRPLPDYVQKVQRHVNANMRGVLVDWLVEVAEEYKLVSDTLYFSVSYIDRYLSLTALSSQKLQLLGVSAMLIASKYEEIKPPEVEEFCYITDNTYTKDQVVEMEADILKSLKFELGGPTVKTFLRRFSKVAQESKDTSDLQFEFLTSYLAELSLLDYNCVKFLPSLVAASVVFLARFMLSPKTHPWNAALYQLTRYKPAELKECAQNIHDLYLSRRGGSLQAVREKYKQHKFKCVATTPSPPEIPVSYFEFRVADP 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03737 397 CDD CYCLIN 259 350 IPR013763 -
Aip06g03737 397 Gene3D - 144 257 - -
Aip06g03737 397 SUPERFAMILY Cyclin-like 118 256 IPR036915 -
Aip06g03737 397 SUPERFAMILY Cyclin-like 259 384 IPR036915 -
Aip06g03737 397 Pfam Cyclin, N-terminal domain 128 256 IPR006671 -
Aip06g03737 397 SMART cyclin_7 263 351 IPR013763 -
Aip06g03737 397 SMART cyclin_7 166 250 IPR013763 -
Aip06g03737 397 PIRSF Cyclin_A_B_D_E 1 389 IPR039361 -
Aip06g03737 397 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 89 393 - -
Aip06g03737 397 CDD CYCLIN 160 249 IPR013763 -
Aip06g03737 397 MobiDBLite consensus disorder prediction 1 19 - -
Aip06g03737 397 ProSitePatterns Cyclins signature. 161 192 IPR006671 -
Aip06g03737 397 MobiDBLite consensus disorder prediction 1 105 - -
Aip06g03737 397 Pfam Cyclin, C-terminal domain 259 381 IPR004367 -
Aip06g03737 397 Gene3D - 128 378 - -
Aip06g03737 397 PANTHER CYCLINS 89 393 IPR039361 -
Aip06g03737 397 SMART Cyclin_C_2 259 382 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03737 Aip-Chr6 134955211 134958162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03737 1 391 Core Cell Cycle Gene Families AT1G47230 55.102 7.49e-150 427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03737 06 134955211 134958162 Aip06g03737 06 134955211 134958162 ECH
Aip06g03737 06 134955211 134958162 Aip07g03531 07 125327208 125329085 PCT