Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03704 ATGAGTGATTTACAATGGAAGAAGGTGGAGGTCTTGGGAGCGGGTTCTTATGGCACTGTTTCTCTTGCCATTCTTGTTGATGAACAAAATCGGTTTCACAGCTTCATTGCTGTAAAGAGCTCCATTCCTAGGTTGGCATTCTCACTGGAGAAAGAAGAACAGATTTTTAAATCACTTTGGGAAGGTGAAAGCGGTGGTTGCCAAGAAATTATTGAATGCTTTGGAACTGAGATCACCGTAGAGCACGGACATCAATTCTACAATCTTTTCTTGGAGTATGCTCCTTATGGTTCTTTGGCTGACTTGATCCACAAGAAACCTCTCCCCGAGACTGAGGTGAGTGTCTATGCACGCATGATTGTTAAAGGACTTTCACATATTCATCGCAAAGGAATCGTCCACTGTGACCTCAAGCCGGAGAACATTCTTGTGTTTCCTTCATTGGATAAAGAGATTGCAAACTATCAATTGAAGATTGCAGATTTTGGATTATCGAAAACCAAAGAGGAGAAAGCAGATGTTGAGTTGTGGAAGTCCAAGCCGAGAGGTACGCCGTCATACTTGTCGCCAGAAGCGTTTTCCGGTCATATTGATGCTCCGATGGATATATGGGCACTTGGTTGCATAGTGATTGAAATGCTCACTGGATTGCCTGCCTGGGGTGAGAGCCCTTTGCTTATTGAGGAGTTGAGGTACTTGGTTGAGCATCATGAACTATCACCCAGGAAGCCGCAGGGAATCGGTTTTTTCTGCCATGATTTTCTGGAAAAATGCTTTACCAAGGATCCTAGCAAGAGCAACGACCAACAACCCCAACACTCCCTCGCGATTCCCGAGGACGACCTCGGCGTTAAGCGCGTGAGGGACCTCAAGAAGCGGAAGCGCGAGGAGCCTGTTGCTTCGGGGACTCTCAGGATCTGGAATCTCGAGTTCATTGAAGAAGAAGATGAGGAAGGCGAGGGTGCGGTTGAGAAGAGGGTTTGGGAGTGGAGGAAGAGGTTGGTGGAGAAGATGAACGGGATTGAGCTGAATCTTGAAGGGGTTAAGTTCAAGCTTGATGTTTCTGTTCCCGTTTCGGATGACTTTGAGGCAATGAAGAAAGATTGGGAACAGTTTTTTGCGTTTAATACTCGAGGTAAGGTTGCGAATGAAGACAGCGGAGACCTGGTTTCAGGCCTTTACTGTAAGATTGTGGTTCAGTTTGAAAAATATAGAGACTTCCATGATGCATTGAGAGTTCTATGTGGTCGCTCATTGCAAAAGGTAGCAAGTTTATCGGCATTTCTTAGTTCGATGGGATCCGTACCTGTGTTGAAGTGGCCTAGGAATGGTTATAGAAAGCTGAATCATAAAGAATCCGATAATGCACTACTTCCAATGACCGAATTGAAAAAGGGCAACAAGGCATCCTTTGAAAAAAGTCAGAGTTGTCTTGAAAGTTCTGATGAATCTTATGACAAGCAACTTTATGGATGGAGTAAGAAACATCGGTCCAAGATGAGTGATTTACAATGGAAGAAGGTGGAGGTCTTGGGAGCAGGTTCTTATGGCACTGTTTCTCTTGCCATTCTTGTTGATGAACAAAATCGGTTTCACAGCTTCATTGCTGTAAAGAGCTCCATTCCCAGGTTGGCATTCTCACTGGAGAAAGAAGAACAGATTTTTAAATCACTTTGGGAAGGTGAAAGTAGTGGTTGCCAAGAAATTATTGAATGCTTTGGAACTGAGACCACATTAGAGCACGGACATCAATTCTACAATCTTTTCTTGGAGTATGCTCCTTATGGTTCTTTGGCTGACTTGATCCACAAGAAACCTCTTCCCGAGACCGAGGTGAGTGTCTATGCACGCATGATTGTTAAAGGACTTTCACATATTCATCGCAAAGGAATCGTCCACTGTGACCTCAAGCCGGAGAACATTCTTGTGTTTCCTTCATTGGATAAAGAGATTGCAAACTATCAATTGAAGATTGCAGATTTTGGATTATCGAAAACCAAAGAGGAGAAAGCAGATGTTGAGTTGTGGAAGTCCAAGCCAAGAGGTACGCCGTCATACTTGTCGCCGGAAGCGTTTTCCGGTCATATTAATGCTCCGATGGATATATGGGCACTTGGTTGCATAGTGATTGAAATGCTCACTGGATTGCCTGCCTGGAGTGAGAGCCCTTTGCTTATTGAGGAGTTGAGGTACTTGGTTGAGCATCATAAACTATCACCCAAGAAGCCGCAGGGAATCGGTTTTTTCTGCCATGATTTTCTGGAAAAGTGTTTTATGAAGGATCCTAGCAAGAGCAACGACCAACAACCCCAACACTCCCTCGCGATTCCCGAGGACGACCTCGGCGTTAAGCGCGTGAGGGACCTCAAGAAGCGGAAGCGCGAGGAGCCTGTTGCTTCGGGGACTCTCAGGATCTGGAATCTCGAGTTCATTGAAGAAGAAGATGAGGAAGGCGAGGGTGCGGTTGAGAAGAGGGTTTGGGAGTGGAGGAAGAGGTTGGTGGAGAAGATGAACGGGATTGAGCTGAATCTTGAAGGGGTTAAGTTCAAGCTTGACGTTTCTGTTCCCGTTTCGGATGATTTTGAGGCAATGAAGAAAGATTGGGAACAGTTTTGTTGCGTTTGA 2625 0.4522 MSDLQWKKVEVLGAGSYGTVSLAILVDEQNRFHSFIAVKSSIPRLAFSLEKEEQIFKSLWEGESGGCQEIIECFGTEITVEHGHQFYNLFLEYAPYGSLADLIHKKPLPETEVSVYARMIVKGLSHIHRKGIVHCDLKPENILVFPSLDKEIANYQLKIADFGLSKTKEEKADVELWKSKPRGTPSYLSPEAFSGHIDAPMDIWALGCIVIEMLTGLPAWGESPLLIEELRYLVEHHELSPRKPQGIGFFCHDFLEKCFTKDPSKSNDQQPQHSLAIPEDDLGVKRVRDLKKRKREEPVASGTLRIWNLEFIEEEDEEGEGAVEKRVWEWRKRLVEKMNGIELNLEGVKFKLDVSVPVSDDFEAMKKDWEQFFAFNTRGKVANEDSGDLVSGLYCKIVVQFEKYRDFHDALRVLCGRSLQKVASLSAFLSSMGSVPVLKWPRNGYRKLNHKESDNALLPMTELKKGNKASFEKSQSCLESSDESYDKQLYGWSKKHRSKMSDLQWKKVEVLGAGSYGTVSLAILVDEQNRFHSFIAVKSSIPRLAFSLEKEEQIFKSLWEGESSGCQEIIECFGTETTLEHGHQFYNLFLEYAPYGSLADLIHKKPLPETEVSVYARMIVKGLSHIHRKGIVHCDLKPENILVFPSLDKEIANYQLKIADFGLSKTKEEKADVELWKSKPRGTPSYLSPEAFSGHINAPMDIWALGCIVIEMLTGLPAWSESPLLIEELRYLVEHHKLSPKKPQGIGFFCHDFLEKCFMKDPSKSNDQQPQHSLAIPEDDLGVKRVRDLKKRKREEPVASGTLRIWNLEFIEEEDEEGEGAVEKRVWEWRKRLVEKMNGIELNLEGVKFKLDVSVPVSDDFEAMKKDWEQFCCV 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03704 874 Gene3D Phosphorylase Kinase; domain 1 499 599 - -
Aip06g03704 874 Gene3D Phosphorylase Kinase; domain 1 2 100 - -
Aip06g03704 874 Gene3D Transferase(Phosphotransferase) domain 1 101 274 - -
Aip06g03704 874 Gene3D Transferase(Phosphotransferase) domain 1 600 773 - -
Aip06g03704 874 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 504 764 - -
Aip06g03704 874 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 5 265 - -
Aip06g03704 874 SUPERFAMILY Protein kinase-like (PK-like) 6 265 IPR011009 -
Aip06g03704 874 ProSiteProfiles Protein kinase domain profile. 505 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03704 874 Pfam FAD linked oxidases, C-terminal domain 324 360 IPR004113 GO:0003824|GO:0050660
Aip06g03704 874 Pfam FAD linked oxidases, C-terminal domain 823 859 IPR004113 GO:0003824|GO:0050660
Aip06g03704 874 SUPERFAMILY Protein kinase-like (PK-like) 504 764 IPR011009 -
Aip06g03704 874 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 504 764 - -
Aip06g03704 874 ProSiteProfiles Protein kinase domain profile. 6 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03704 874 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 5 265 - -
Aip06g03704 874 ProSitePatterns Serine/Threonine protein kinases active-site signature. 631 643 IPR008271 GO:0004672|GO:0006468
Aip06g03704 874 Pfam Protein kinase domain 7 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03704 874 Pfam Protein kinase domain 506 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03704 874 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Aip06g03704 874 ProSitePatterns Protein kinases ATP-binding region signature. 511 538 IPR017441 GO:0005524
Aip06g03704 874 SMART serkin_6 505 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03704 874 SMART serkin_6 6 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03704 874 ProSitePatterns Protein kinases ATP-binding region signature. 12 39 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03704 Aip-Chr6 134563503 134570391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03704 503 764 MAP Kinase Kinase Kinase AT4G36950 40.892 1.08e-51 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aip06g03704 Pkinase 9.3e-42 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03704 06 134563503 134570391 Aip06g03704 06 134563503 134570391 ECH