Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00116 ATGTCCGGTTCGCTCGATCGGTTCGCACGCCCTTGCTTTGAAGGTTTTTCTGGTCATGATGAAAGGAGAGAGCGGAAATCAGATTTCGAGAACTCAGAAGACGATCGGCGGACGCGAATTGGCAGCCTGAAGAAGAAGGCCATCAATGCGTCCAGCAAATTCAGACATTCTCTTAGGAAGAAGAGCAGCCGGAGGAAGAGCACTGGCCGGACCAATTCGGTCTCCATTGAGGATGTTCGAGATGTTAAGGAGCTCCAGGCAGTGGAGTCATTTCGGCAGGCTCTTATGTCGGATAACTTGTTGCCAACGAGACATGATGACTACCATATGTTGTTGAGATTCTTGAAAGCTAGGAAATTTGATATCGAAAAAGCAAAGCACATGTGGGCTAACATGCTCCAATGGAGGAAGGACTACGGCACTGATACAATCATAGAGGATTTTGAGTTCTCTGAGTTGAATGAAGTCCTACAGTACTATCCACATGGTTATCACGGAGTGGACAAGGAAGGAAAACCCGTCTATATTGAAAGGCTAGGTAAAGTTGATCCCAATAAGCTTATGCAAGTAACTACAATGGAAAGGTATTTGAGATACCATGTTCAGGGTTTTGAGAAAACGTTTGCTCTTAAGTTTCCTGCATGTTCTATTGCCGCAAAGAGACATATTGATTCGAGCACAACCATTTTGGATGTTCACGGCGTGGGTTTCAAAAACCTAACCAAATCTGCGCGGGAACTCATCATGCGGCTGCAGAAGATTGATGGTGACTACTATCCGGAAACATTATGCAGAATGTTTATAATCAATGCTGGCCCTGGTTTTAAGCTACTCTGGAACACTATCAAATCATTTATTGATCCAAAAACAACTTCAAAGATAAATGTTCTGGGAAACAAGTTTCAGAATAAATTACTTGAATTTATTGATGCAAGTGAGCTGCCAGAATTTCTTGGCGGTATTTGTAATTGTGCAGATGAAGGTGGTTGCATGAGATCTGATAAAGGGCCATGGCAAGACCCAAACATTCTAAAGGTGATTCTTAGTGGTGAAGTAACCTCTAGACAGATAGTAACAGTTTCAAATGACGAGGGAACAGTGATTGAATGTGAAAAGACGTGTTATCCATTGATACGGAGTAGTGATACATCTACAGGAGAATCAGGATCTGAAGTTGAAGACATTACTTCTCCCAAAGCAAGTGGGAATTATACAAACCCTAGGTTGACTCCTGTCCATGAAGAAGCAAGATTGGTTGGCAAAAATAGCCATGCTAGTGGTTTATCTGAGTATGATGAGTATGTTCCAATGGTTGACAAGACCGTTGATGTTGCATGGAAGGAGAAGCAAGCCAAAACTCAAAATACATTTGGCTCCAAAGAAAAGCTTACATTGATTACCACAAAATCTCCGGACGGAAGATTTTCATATATATGGGCTATTATAGTGGGCTTCTTTGTCTCCATCTTCGCGTTCGTTCATTCAATAGCACGTCATATAAAGGTAATAAAGGATTCTAAATCCATTGCTGCCCAAAATATGTCAAACATAGCAGCGGATTCACTACCCAAGGAGGAATCATGTTCCCTTTCACCCGTACTTGGATTCAGAAAGAACGAACTCGTCTCAGCTGCTTTGAGACGCCTTGGTGAGCTTGAAGAGAAGGTTGGCATGCTACAGTCAAAACCTAATGTGATGCCATGCGAGAAAGAGGAACTATTGAATGCCGCGGTCTATCGTGTGGACGCATTGGAAGCTGAACTGATTGCTACGAAAAAGGCGTTGTACGAAGCTTTGATAAGACAAGAAGAACTTCTAGCTTACATAGACAGACAAGAGAGAAGGAAATTTGAGAAAAAGAAGTTTTGCTGGTGA 1875 0.4235 MSGSLDRFARPCFEGFSGHDERRERKSDFENSEDDRRTRIGSLKKKAINASSKFRHSLRKKSSRRKSTGRTNSVSIEDVRDVKELQAVESFRQALMSDNLLPTRHDDYHMLLRFLKARKFDIEKAKHMWANMLQWRKDYGTDTIIEDFEFSELNEVLQYYPHGYHGVDKEGKPVYIERLGKVDPNKLMQVTTMERYLRYHVQGFEKTFALKFPACSIAAKRHIDSSTTILDVHGVGFKNLTKSARELIMRLQKIDGDYYPETLCRMFIINAGPGFKLLWNTIKSFIDPKTTSKINVLGNKFQNKLLEFIDASELPEFLGGICNCADEGGCMRSDKGPWQDPNILKVILSGEVTSRQIVTVSNDEGTVIECEKTCYPLIRSSDTSTGESGSEVEDITSPKASGNYTNPRLTPVHEEARLVGKNSHASGLSEYDEYVPMVDKTVDVAWKEKQAKTQNTFGSKEKLTLITTKSPDGRFSYIWAIIVGFFVSIFAFVHSIARHIKVIKDSKSIAAQNMSNIAADSLPKEESCSLSPVLGFRKNELVSAALRRLGELEEKVGMLQSKPNVMPCEKEELLNAAVYRVDALEAELIATKKALYEALIRQEELLAYIDRQERRKFEKKKFCW 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00116 624 MobiDBLite consensus disorder prediction 13 42 - -
Aip06g00116 624 CDD SEC14 153 320 IPR001251 -
Aip06g00116 624 SMART CRAL_TRIO_N_2 107 132 IPR011074 -
Aip06g00116 624 MobiDBLite consensus disorder prediction 1 75 - -
Aip06g00116 624 MobiDBLite consensus disorder prediction 381 407 - -
Aip06g00116 624 Gene3D - 140 350 IPR036865 -
Aip06g00116 624 SUPERFAMILY CRAL/TRIO N-terminal domain 83 148 IPR036273 -
Aip06g00116 624 Gene3D - 53 139 - -
Aip06g00116 624 Pfam CRAL/TRIO domain 158 320 IPR001251 -
Aip06g00116 624 PRINTS Cellular retinaldehyde-binding protein signature 110 132 - -
Aip06g00116 624 PRINTS Cellular retinaldehyde-binding protein signature 279 298 - -
Aip06g00116 624 Pfam CRAL/TRIO, N-terminal domain 105 131 IPR011074 -
Aip06g00116 624 MobiDBLite consensus disorder prediction 49 67 - -
Aip06g00116 624 SMART sec14_4 152 323 IPR001251 -
Aip06g00116 624 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 152 326 IPR001251 -
Aip06g00116 624 SUPERFAMILY CRAL/TRIO domain 152 345 IPR036865 -
Aip06g00116 624 PANTHER SEC14P-LIKE PHOSPHATIDYLINOSITOL TRANSFER FAMILY PROTEIN 3 621 - -
Aip06g00116 624 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 3 621 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00116 Aip-Chr6 1105939 1111529 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00116 06 1105939 1111529 Aip06g00116 06 1105939 1111529 ECH