Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00115 ATGGGTTCTCTGCAAGGACCAGTTTTGTGCCCTTCTGTTCATGCTAAACTAGCAGGGTTGTTCAGCCTTCCTATGATTGGACCAATGAATGTTAGCTGTGTTAGAAGTGAATTCTGGGGATTCAAGGAACTCGGTGGCGGCAGCGGCGGTGGTGCAAAAGTAAAGCCAGGGATCCTTTCTTGCAATGTGCACATGAGGAAGTGCAAGACAGCAGTGCATTGTAGTTTCAACTCGTCTTCGAATGACAGCAGTGGAAGTGCCGCGGAGAATTTCAATGAGAAAGATGAAGATTATGTCAACTCTAGCATTGTTGAAGCTGTTGAGGTGAAGAGCGGAGCAGATGGCTTCATAATCAAAATGAGGGACGGAAGACACTTACGATGTGTTCATAACAATCCTCAGGGAGGGCATCTTCCAGAGTATGCACCACATCCTGCTATTGTTTTGAAGATGGAAGATGGCACCGGCTTGCTTCTGCCGATAATTGTTTTGGAGATGCCGAGCGTTTTACTAATGGCAGCCATGCGCAATGTTCCCATAGCTAGGCCTACTTTATATCAAGTAGTGAAGGAGATGGTTGACAAGATGGGTTACGAAGTTAGACATGTCAGGGTTACAAGAAGAGTTCATGAGGCATATTTCGCTCAGTTGTATCTTACCAAGGTTGGAAACGAGGCAGAGTCTATGAGCTTTGATCTTCGACCTTCGGATGCTATCAATATTGCAGTAAGATGCAAGGTGCCAATTCAAGTCAACAAATACTTGGCATTCAGTGATGGAATGAGAGTAGTTGAATCTGGAAAGCTTTCGACGCAGTTCCCTTTGGACGGTCAAATATTTGCCGAATTGGACAAGCCAAGTGGTCAGCCTTGTGTTGAAACTCAGGAGTTCAATCTCTTGCATGAAATGCTGAAAGCTGTTAACGAAGAGCGCTATCAAGATGCCGCTTTGTGGAGGGACCAACTCAATCAACTTAGGTCTGGAAAAAATGTGAATAACAGATAA 1005 0.4488 MGSLQGPVLCPSVHAKLAGLFSLPMIGPMNVSCVRSEFWGFKELGGGSGGGAKVKPGILSCNVHMRKCKTAVHCSFNSSSNDSSGSAAENFNEKDEDYVNSSIVEAVEVKSGADGFIIKMRDGRHLRCVHNNPQGGHLPEYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAMRNVPIARPTLYQVVKEMVDKMGYEVRHVRVTRRVHEAYFAQLYLTKVGNEAESMSFDLRPSDAINIAVRCKVPIQVNKYLAFSDGMRVVESGKLSTQFPLDGQIFAELDKPSGQPCVETQEFNLLHEMLKAVNEERYQDAALWRDQLNQLRSGKNVNNR 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00115 334 ProSiteProfiles Bifunctional nuclease (BFN) domain profile. 128 263 IPR003729 GO:0004518
Aip06g00115 334 Pfam Bifunctional nuclease domain 147 255 IPR003729 GO:0004518
Aip06g00115 334 Gene3D Bifunctional nuclease domain 133 269 IPR036104 GO:0004518
Aip06g00115 334 PANTHER NUCLEASE IN BASAL DEFENSE RESPONSE PROTEIN 1 332 - -
Aip06g00115 334 SUPERFAMILY Hypothetical protein TM0160 128 267 IPR036104 GO:0004518
Aip06g00115 334 Pfam UvrB/uvrC motif 302 326 IPR001943 GO:0005515
Aip06g00115 334 PANTHER VON HIPPEL-LINDAU PROTEIN 1 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00115 Aip-Chr6 1099226 1103050 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00115 06 1099226 1103050 Aip06g00115 06 1099226 1103050 ECH