Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00094 ATGATAATGGTGTCTCCGATAATTTCCCCTCCTTCATCTTCATCTTCCACACTTCATCTTCATTCCTTCGAATCTACCTTCTTCTTCTCCACTCCCTTACTTCCACAAAGGAACATACGATTTCAAAGTAGATGCAATAAGTTTGAGAAGCATAGATGGAAAGATACTGTACGGTGCAGATTTATCAGCTCAAATGCACCTTCAACTTCAACATCAAATTCAAATTCAAATTCAAATTCAATGACGTTGATGAAGGAACCTCACAAGTACTTTGACCAAGTTTTCATTACCGTTCGTGCTGGTGATGGTGGGCATGGAGCTATACTCAATGCCCCCAATACTCAAAGATCACCAACAAAACAAGATCAGAAGAAGGATAAGGACAAGATTAAGAAGAAAAGCTCCTTGAAGAGGGACTTTGATGGTTCACTCATACTCCCAATGGGTGGACATGGTGGTGATGTGGTTATCTACGCAGATGAGGGAAAGGACACATTGTTGGAATTTCACAACAAGGGAAGGTACAATGCTAAGCGTGGTGGAAATGTTGATGCAATGGGTGTGTTGAGTTCACTGTTGCGTAATGGAATCACGGCCCCAACTTTGCGCATTCCTGTGCCTGTAGGTACAGTTGTGAAAAACAAACGAGGGAAGACGTTGGCTGATCTAGCACAACCTGGCGATGAAGTTCTTGTAGCTAGGGGTGGACAAGGAGGGATTAGTTTGTTAGAAGTTCCGCAGCATCAAAAGAAAAGGATGATGACTTTGACAACTAACGTGATGAGGGATGAATCTGATAAGGTATTAGTTCACGGTCAGCCTGGGGAAGAAATTAAATTGGAGTTGATCCTGCGAGTAGTTGCCGATGTTGGTCTAGTTGGACTTCCAAATGCTGGAAAATCGACACTTCTGGCAGCGATTACACTCGCAAAACCTGATATTGCTGACTATCCATTTACAACATTAATGCCAAACCTCGGCCGCCTTGGCGGTGATCCTACCTTAGGGGCAGGGATGTATTCATCTGAAGCTACGTTGGCAGATTTGCCTGGCCTTATAGAAGGAGCTCACTTAGGAAAGGGTCTTGGCCGCAATTTTTTGAGGCACCTGAGGCGGACTCGAGTGTTGGTTCATGTTGTTGATGCGGCCGCTGAGAACCCTATAAATGACTACAGAACTGTTAGAGAAGAGTTGCGCATGTATAATCCCGAGTACCTTGAAAGACCATACATTGTTGTTTTGAATAAGATTGACATATCCGAGGCAAAGGACAGACTTTCATCACTTTCTGAAGAAATTATGAAAATAGGCAACAATAGCACAGCTTCTGAACCGAAACCAAGTCCGGATGAATCATCATCTGATGAAGGTGACCTGCCGGAGAAAGTGCTCGAGGACTATCCACCACCTCTCTCGGTTGTTGGAGTTAGTGTTCTAAAGGGTATCAAGATAAAGGAGATGTTGAAGGAAATAAGGGCTGCTTTAAGGAAGTGCACTGGTTCCAATGAGCCTTCGAGTGTGCCACCGCCGCCTTGA 1536 0.4421 MIMVSPIISPPSSSSSTLHLHSFESTFFFSTPLLPQRNIRFQSRCNKFEKHRWKDTVRCRFISSNAPSTSTSNSNSNSNSMTLMKEPHKYFDQVFITVRAGDGGHGAILNAPNTQRSPTKQDQKKDKDKIKKKSSLKRDFDGSLILPMGGHGGDVVIYADEGKDTLLEFHNKGRYNAKRGGNVDAMGVLSSLLRNGITAPTLRIPVPVGTVVKNKRGKTLADLAQPGDEVLVARGGQGGISLLEVPQHQKKRMMTLTTNVMRDESDKVLVHGQPGEEIKLELILRVVADVGLVGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLGGDPTLGAGMYSSEATLADLPGLIEGAHLGKGLGRNFLRHLRRTRVLVHVVDAAAENPINDYRTVREELRMYNPEYLERPYIVVLNKIDISEAKDRLSSLSEEIMKIGNNSTASEPKPSPDESSSDEGDLPEKVLEDYPPPLSVVGVSVLKGIKIKEMLKEIRAALRKCTGSNEPSSVPPPP 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00094 511 Coils Coil 419 439 - -
Aip06g00094 511 Gene3D GTP1/OBG domain 89 286 IPR036726 -
Aip06g00094 511 Gene3D - 287 503 IPR027417 -
Aip06g00094 511 ProSitePatterns GTP1/OBG family signature. 348 361 IPR006074 GO:0005525
Aip06g00094 511 PRINTS GTP1/OBG GTP-binding protein family signature 290 310 IPR006073 GO:0005525
Aip06g00094 511 PRINTS GTP1/OBG GTP-binding protein family signature 311 329 IPR006073 GO:0005525
Aip06g00094 511 PRINTS GTP1/OBG GTP-binding protein family signature 346 361 IPR006073 GO:0005525
Aip06g00094 511 PRINTS GTP1/OBG GTP-binding protein family signature 363 381 IPR006073 GO:0005525
Aip06g00094 511 Pfam GTP1/OBG 149 285 IPR006169 -
Aip06g00094 511 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 288 496 IPR031167 GO:0005525
Aip06g00094 511 MobiDBLite consensus disorder prediction 119 135 - -
Aip06g00094 511 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 289 497 IPR027417 -
Aip06g00094 511 Pfam 50S ribosome-binding GTPase 289 416 IPR006073 GO:0005525
Aip06g00094 511 ProSiteProfiles Obg domain profile. 88 287 IPR006169 -
Aip06g00094 511 CDD Obg 288 426 IPR031167 GO:0005525
Aip06g00094 511 PANTHER DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED 62 504 IPR045086 GO:0003924|GO:0005525
Aip06g00094 511 MobiDBLite consensus disorder prediction 449 463 - -
Aip06g00094 511 SUPERFAMILY Obg GTP-binding protein N-terminal domain 149 252 IPR036726 -
Aip06g00094 511 MobiDBLite consensus disorder prediction 437 469 - -
Aip06g00094 511 PANTHER GTP-BINDING PROTEIN OBGC2-RELATED 62 504 - -
Aip06g00094 511 MobiDBLite consensus disorder prediction 106 135 - -
Aip06g00094 511 TIGRFAM small_GTP: small GTP-binding protein domain 289 440 IPR005225 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00094 Aip-Chr6 905737 910974 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00094 06 905737 910974 Aip06g00094 06 905737 910974 ECH