Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00090 ATGGCTCGCCTCTCCCTCCTCCTCCTCCTCCTCGCCGCCGCCGTCGCAACCGCCGTCGACGACCAAGCGGATCCCTTGATCCGTCAAGTAACCGATGGAGACCATCACATGCTCAACGCCGAGCACCACTTCACAACCTTCAAGACTAAGTTCGGAAAGTCTTATGCCACTCAAGAAGAGCACGATTACCGCTTTGGCGTCTTCCAGGCGAACCTGAGGAGGGCGAAGCTGCACGCGAAGCTGGATCCGTCGGCGGAGCACGGTGTCACGAAATTCTCCGATCTGACGCCGGAGGAGTTCAAGAGGCAGTACCTTGGGTTGAAGCCGCTGCGGCTTCCGTCGAGCGCTAACAAGGCTCCAATCCTGCCGACGAGCGATCTTCCAGAGAATTTCGATTGGCGTGACAAGGGAGCTGTTACTCCAGTCAAGAACCAGGGCTCTTGTGGTTCATGTTGGTCGTTTAGCACGACTGGAGCTTTGGAAGGAGCTCATTATCTGTCCACCGGAGAGCTTGTCAGCCTTAGTGAGCAACAGCTTGTAGACTGTGACCATGTGTGTGATCCAGAAGAATATGGAGCATGTGACGCAGGCTGCAATGGTGGGTTGATGAACAATGCTTTTGACTACATACTCCAGGCTGGAGGAGTACAGACAGAGAAGGACTATCCTTACACTGGAAGAGACGAGACCTGCAAATTCGACAAGAGCAAGGTCGCAGCTACGGTTGCAAATTTCAGTGTGGTTTCCCTTGATGAAGACCAAATTGCTGCAAATCTAGTGAAGCATGGCCCTCTTGCAGTTGGTATCAATGCAATATTCATGCAGACATACATAGGGGGAGTCTCATGCCCCTACATCTGCGGCAAGAATCTGGATCATGGCGTGCTCCTAGTGGGTTATGGCGCGGCCGGATATGCTCCCATTCGCTTCAAGGACAAGCCATTCTGGATCATCAAGAATTCATGGGGAGAGAGCTGGGGAGAGGATGGATACTACAAGATCTGCAGGGGTAAGAATGTGTGTGGAGTGGATTCCATGGTCTCAAGTGTAGTAGCTACTACATTTACATCTAGCAACAATTAA 1083 0.5217 MARLSLLLLLLAAAVATAVDDQADPLIRQVTDGDHHMLNAEHHFTTFKTKFGKSYATQEEHDYRFGVFQANLRRAKLHAKLDPSAEHGVTKFSDLTPEEFKRQYLGLKPLRLPSSANKAPILPTSDLPENFDWRDKGAVTPVKNQGSCGSCWSFSTTGALEGAHYLSTGELVSLSEQQLVDCDHVCDPEEYGACDAGCNGGLMNNAFDYILQAGGVQTEKDYPYTGRDETCKFDKSKVAATVANFSVVSLDEDQIAANLVKHGPLAVGINAIFMQTYIGGVSCPYICGKNLDHGVLLVGYGAAGYAPIRFKDKPFWIIKNSWGESWGEDGYYKICRGKNVCGVDSMVSSVVATTFTSSNN 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00090 360 PRINTS Papain cysteine protease (C1) family signature 145 160 IPR000668 GO:0006508|GO:0008234
Aip06g00090 360 PRINTS Papain cysteine protease (C1) family signature 293 303 IPR000668 GO:0006508|GO:0008234
Aip06g00090 360 PRINTS Papain cysteine protease (C1) family signature 315 321 IPR000668 GO:0006508|GO:0008234
Aip06g00090 360 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 19 352 - -
Aip06g00090 360 SMART Inhibitor_I29_2 44 100 IPR013201 -
Aip06g00090 360 Pfam Papain family cysteine protease 127 349 IPR000668 GO:0006508|GO:0008234
Aip06g00090 360 Pfam Cathepsin propeptide inhibitor domain (I29) 44 100 IPR013201 -
Aip06g00090 360 SMART pept_c1 127 351 IPR000668 GO:0006508|GO:0008234
Aip06g00090 360 CDD Peptidase_C1A 128 350 IPR039417 -
Aip06g00090 360 Gene3D Cysteine proteinases 19 351 - -
Aip06g00090 360 PANTHER CYSTEINE PROTEASE RD19C-RELATED 19 352 - -
Aip06g00090 360 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 291 301 IPR025660 -
Aip06g00090 360 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 145 156 IPR000169 -
Aip06g00090 360 SUPERFAMILY Cysteine proteinases 41 350 IPR038765 -
Aip06g00090 360 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 315 334 IPR025661 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00090 Aip-Chr6 860335 863002 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00090 06 860335 863002 Aip06g00090 06 860335 863002 ECH
Aip06g00090 06 860335 863002 Aip07g02489 07 104216681 104218858 PCT