Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00089 ATGGCAGGTTTATTCTCTCTAGGTCCACATCATAGCAAACAAGAAGAACAAGATCAAGAAGAAAACAACAACAACAACAGCAACATCCAATTGCTATTGAGAAACGAAGAGATCTACACCAACAGCAGCACCACCAACACCAACACCAACAGAGGGTTCGAGATATGGCCTCATCATCATCAACCAAGCTACTACTCCTTCGGTTTGGGTCCGTCTAGCGAGAGAAACACCACCACAAACCTAAACGACGACGTTTCGGTGTCTTTCTCTGATGAGTCTAACCGGTTCGGGTTCACCGTCATGAGATCTTCTTCTTCCGGATCGGGTTTAGGAAGCGGCACCAATTGTCAAGACTGCGGTAACCAAGCCAAGAAAGACTGCGTCCACCTTCGCTGCCGAACCTGCTGCCGAAGCCGAGGGTTTCAATGTTCTACTCACGTTAAAAGCACCTGGGTTCCTGCTGCCAAACGACGCGAGCGCCAACACACTCTCGCGTCGTTACAGCAGCAGCAACCGGGGAGAGCAGGAGAAGGAGAAGGAGGAGGCGGCGATGTTCACTCTAGACGAACTAGAGAAGCCTCCGCCTGTGTTCCCATGCCGATTACCACTACAGGGTTGGAACTAGGGCAATTCCCTCCGGAGTTGAACTCACCGGCGGTGTTCCGGTGCGTCAAAGTCAGCCCAATGGACGCACCTGATGAGAGGTACGCGTATCAAACGGCTGTCAATATAGGAGGCCATGTTTTCAAAGGGATTCTCTACGATCAAGGTCCAGATGGTCCTTTCGCCACCAATGCCGCCACCGCCGGCGAAGGCTCCTCCCACGGAGGAGCTGAGCCTCATCATCAACAACTGAGTCTCATAACAACCACCACCGGTGCCGGCATCACATTTGACCCTTCACAGCTTTATCCGGCGCCGATGAACGCTTTCATGGCCGGTACGCAATTCTTTCCGCCCCCGAGAACCTAG 972 0.5278 MAGLFSLGPHHSKQEEQDQEENNNNNSNIQLLLRNEEIYTNSSTTNTNTNRGFEIWPHHHQPSYYSFGLGPSSERNTTTNLNDDVSVSFSDESNRFGFTVMRSSSSGSGLGSGTNCQDCGNQAKKDCVHLRCRTCCRSRGFQCSTHVKSTWVPAAKRRERQHTLASLQQQQPGRAGEGEGGGGDVHSRRTREASACVPMPITTTGLELGQFPPELNSPAVFRCVKVSPMDAPDERYAYQTAVNIGGHVFKGILYDQGPDGPFATNAATAGEGSSHGGAEPHHQQLSLITTTTGAGITFDPSQLYPAPMNAFMAGTQFFPPPRT 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00089 323 MobiDBLite consensus disorder prediction 1 24 - -
Aip06g00089 323 MobiDBLite consensus disorder prediction 158 191 - -
Aip06g00089 323 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 321 IPR007818 GO:0003700|GO:0006355
Aip06g00089 323 PANTHER PROTEIN SHI RELATED SEQUENCE 7 1 321 - -
Aip06g00089 323 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 115 157 IPR006510 -
Aip06g00089 323 Pfam Domain of unknown function (DUF702) 113 259 - -
Aip06g00089 323 MobiDBLite consensus disorder prediction 263 282 - -
Aip06g00089 323 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 210 258 IPR006511 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00089 Aip-Chr6 845534 846720 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Aip06g00089 DUF702 1e-63 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00089 06 845534 846720 Aip07g02487 07 104200694 104203217 ECH
Aip06g00089 06 845534 846720 Aip03g00785 03 7606763 7608014 ECH
Aip06g00089 06 845534 846720 Aip06g00089 06 845534 846720 ECH
Aip06g00089 06 845534 846720 Aip07g02487 07 104200694 104203217 PCT