Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00088 ATGAAGATCCAGTGCGACGTGTGTAGCAAGGACGAGGCATCGGTGTTCTGCACCGCCGATGAAGCCGCCCTATGCAACGGCTGCGACCACCGTGTCCACCATGCCAACAAGCTCGCATCCAAACACCAACGCTTCTCTCTTCTCCGTCTCTCCACAAAGCAAAACTTCCCTCTCTGTGATGTTTGCAAGGAGAGAAGGGCCTATGTGTTCTGCCAGCAAGATAGAGCGATTCTATGCAAAGATTGTGATATTCCAATTCATTCTGCAAATGAACACACAAAGAAGCATACTAGATTCCTTGTCACCGGTGTTAAACTCTCGGATTCTGCTAAACTCTATTCAGCCGCCACTACTCCTCCTTCTCCTTTGATTGGAAGTAATAGTAGTAGTGACTCTAATTCCAAAGCTTCTCAGGTACCAAAATCTTTGGTATCTGAGCCGACTTCTTCAGCAGCATCAACCGGGCTTCCCCCAATTAAGGGAGGAAGCTTGGTTGGTGCTGCTGAAGAAGACGCTTCCACGAGTACTCGCAGCATATCTGAGTACTTGATAGAGACTATACCTGGCTGGCAAGTTGAAGACTTTCTTGATTCATCAACTGTTCCCTTTGGTTTCTCTAAGGGTGGTGATGAGATGTTTTCAGTGTTTGACGGTGAAATTGATGGAAATATGTATGCATTTTCAACAATGGAGAAGATGGGGATGTGGGTTCCTCAAGCACCACCGCCACCACCACCACCACCTCTTGTATATCCTTCACAATTTTGTGAGGCAAAAGATGTCACCAACAACAACATCAAAGGTAGCATCAGCAGATCAAGGTTGGCGGATGATAATTTCATTGTCCCTCAGATTAATCTTCAATCCAACAACACCAAGAGACCAAGATATCTATGGTAG 900 0.46 MKIQCDVCSKDEASVFCTADEAALCNGCDHRVHHANKLASKHQRFSLLRLSTKQNFPLCDVCKERRAYVFCQQDRAILCKDCDIPIHSANEHTKKHTRFLVTGVKLSDSAKLYSAATTPPSPLIGSNSSSDSNSKASQVPKSLVSEPTSSAASTGLPPIKGGSLVGAAEEDASTSTRSISEYLIETIPGWQVEDFLDSSTVPFGFSKGGDEMFSVFDGEIDGNMYAFSTMEKMGMWVPQAPPPPPPPPLVYPSQFCEAKDVTNNNIKGSISRSRLADDNFIVPQINLQSNNTKRPRYLW 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00088 299 MobiDBLite consensus disorder prediction 121 172 - -
Aip06g00088 299 MobiDBLite consensus disorder prediction 121 156 - -
Aip06g00088 299 ProSiteProfiles Zinc finger B-box type profile. 54 101 IPR000315 GO:0008270
Aip06g00088 299 PANTHER B-BOX ZINC FINGER PROTEIN 19 1 296 - -
Aip06g00088 299 SMART bboxneu5 4 47 IPR000315 GO:0008270
Aip06g00088 299 SMART bboxneu5 54 101 IPR000315 GO:0008270
Aip06g00088 299 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 296 - -
Aip06g00088 299 CDD Bbox1_BBX-like 5 47 - -
Aip06g00088 299 Pfam B-box zinc finger 57 94 IPR000315 GO:0008270
Aip06g00088 299 Gene3D Classic Zinc Finger 1 100 - -
Aip06g00088 299 CDD Bbox1_BBX-like 58 101 - -
Aip06g00088 299 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00088 Aip-Chr6 830961 833087 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aip06g00088 zf-B_box 9.2e-07 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00088 06 830961 833087 Aip03g00129 03 1163720 1169863 ECH
Aip06g00088 06 830961 833087 Aip06g00088 06 830961 833087 ECH