Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00083 ATGGATGGAGGGGATGTTAGGGCTGGGGGAAAGAAGAAGAGACCTAAGCCTGTGGAAATTGGATTTGATTCGGATGATGATGAGCCGATTGGCTCTATGTTTAAGCTGAGGAAGTCACGTGGGTCTAAGAAGAAGGTTGGTTCTGCGGCTTCTGAGGGGTCTTGTGGCGATGGGGCCAAGAATGTCGATGCTGTGACAAGAAAGTTGGTTGATGCAAAGGATGATTTGGTGGGAGGTATGGATGATACCTTGGCGAGTTTTAGGAAGAGGTTGAAGGGATCTGGAGCCACCAGAGCAACTAGTTCCGTGTTGAATGCAACGGTGGAGTCTTCTGACAGGTCTCTTGATCTTTCTGTTGACGGAATTGAGGGTCATGTTGCGTCTGACGATGATGTGGTAGCTCGCGGATCTGTGAGAGGCTCCAAGGATGAGAAAGGGGTGAATTTATCCGTTGGTGACCGCTTGCAGCATTCTTCTGATGAGAAAATGGAAGATTCATTATCAGCAATTTTCCGAAAGGCACAATCTAGTTCTGTTAGGAAATTCCGAGGCTCTTCAGGTTCAAGGAAGAAGAAAGAGAGTCACAATGGGGATAATAAAAAGCATGGGGATGGCTGTTTTCTGGTGGAAGTCACTGAAGGTATTTGTCATTCTAACATATTAGATGTCTGCAATGAAGATAGACAACAGTTGTCTTCTATTCAATCTGAAAATTTTCGTTGTGCTTCTGACCAAGAAAGAATCCTCAATGATGCTTTAAAGCAGTGTTCTTCCATGTCACATGACGTTGAAATGATTGATAATGGCTCTCTCTCTAAAGTAGTGGAAGGGGTATCTGGTACCGAGGGCGAGGTGAAGAATAAACTGACTGATGAACTAGCTCCAGTTTGTAATTTTGGTTCAGAACATGGCTGCACGTCTATGAAGAAAGAAAATTTCTTACCTCCTTGTGACACTGAGCCCTTGGTTAAATCAACCGGAAATATATCGAATGAGAATAATTATATTGTTACTGGAAAAGTTTTCTCTGGATGCCAGGTGGAGGTAGATGAAGGTGTAAAATCTGAAACCGAAGTCGTTTCGGATAAAGATTGTTGTGACTATAATGGTTTAAATACAAAGCCTGATGTTAAAGATTTAGTTCTAGGTATTTCACTTGAAAAAAATGATGTAACTGCCTCTGGTAGCTTATCTCCTAAAATGTCTGTGGAAGCCAATGAATCTGAATTAGATGTTCTGTCAAATCACTCGAAGAAACCTTTAGAAGTGTATAGTGCTTCAATTCTGAAATGCAACTCCATGTTAGATCCGGTTCAATCTGATGGATCCTCCCTTCCATCTGCACCAGATGAAAATGAGAATAATGCAGAATATAATGATTCTCTCTCTGATTTTGCCTACAAAGACAGTAAAATTCGTGCTGTGCGAAAGGCTAAAATGCATAAGCATGGAGATATGACTTATGAGGGTGATGCTGATTGGGAGAATTTAACAAATGATCAAGCTCTTAATGAAAACCATGCTGCTGAAGATTCTGAAAGTGTTGCAGTAGTTGCTGTATCAGCTGGGCTGAGAGCCCATGCAGCTGGTCCAATGGAGAAAATAAAGTTTAAGGAGATGTTGAAGCGTAAAGGTGGTCTCAAAGAATATTTGGCTTGCAGAAATCAGATCTTAAGTCTTTGGAGTAGAGATGTTACGCGTGTTTTGCCTCTTGCTGAATGTGGAGTTAGTGATGCTCAATCTGAGGATAAAAGTCCTCGTTCATCTCTTACTAGGGATGTCTACACATTTCTCGATCAATGTGGTTATATAAACATTGGTATTGCTTCTCAAAAGGATGTTGGAAGTAGTGCAATGCATTCTTATAAACTTGTGAAAGAAAAAGGTTTTGAGGAAAGCTCCACTGCTTCAATTGCTGACTCTGAAGAGGGAGTATCATTTATTGTTGGTCAAACTAAAATGTCAGATGTGTCCATGGAGAATAACCATGGCCTTAAAAGGGAGGATGAAGACGTACCAGCTGAAGCTACAGAAGGCAGGAACGCAGCAACGATAAATTTATTAAACACAAAACAACCTAAAGGAGAAAATTTTGATTCCCAAGATAATGATGAGATTCAGGAAGGACTTGGTGGAACTAGACATGTCAATATAAACAATGTTGTTCCTTCCTCCAAATTTCCTGATTGCAGACTGGCTTCTGCTGTAGCTACAGAACAGAGCAATGAATCTATCTGTGTTAAAACCGTCTCGGCTGATCGCATAGGTGATCAAATGTTGTCTGATTCTGAGGCTAGAAAGAGAGTTATTGTCATTGGAGCTGGTCCTTCTGGGCTAACTGCTGCTCGTCACTTGCAACGTCAGGGGTTGACTGTGACTGTACTCGAGGCAAGGAATAGGATAGGAGGTCGAGTATTTACAGATCGCTCATCCCTTTCTGTCCCTGTGGATCTTGGTGCTAGCATTATCACTGGTGTTGAGGCTGATGTGGCCACTGAGAGAAGACCAGATCCTTCCTCACTGGTTTGCTCACAGTTGGGCCTTGAGTTGACAGTACTGAACAGTGACTGTCCTCTCTATGACATAATGACAGGACAAAAGGTCCCGGCAGATATGGATGAGGCACTGGAAGCTGAATACAATAGTCTTCTTGATGGTATGGAATTGCTTGTTGCTCAGAAAGGTGAACAAGCAATGAGAATGTCTCTTGAAGATGGTTTAGAGTATGCCCTTAAGATTCGCCGCTTGGCACATGCTGGAAGTGGTGAAGAAATTGAACAAGTCAATTCTGGAGATAGTCCGTTGGATTCCAAAAAGGTCAGTACAGTGGAAAAAAAATTCGAGCAGGACATTTTAAGTCCTCTGGAGAGAAGGGTCATGGATTGGCACTATGCTCATTTGGAGTATGGATGTGCAGCTTCACTTACAGAAGTTTCTCTTCCCAACTGGAATCAAGATGACGTGTATGGAGGATTTGGAGGAGCTCATTGTATGATTAAAGGCGGTTACAGTGCTGTTGTTGAGTCTCTTGCAGAAGGGCTTCCTATTCAATTGAACCATGTTGTAACAAATGTGTCATACGATATCGAGGAACCTGGTTGCTGCAGTAAAGTCAAAGTTTCCACATCAGATGGCAGTGAGTTCTTTGGGGATGCTGTTCTCATCACCGTTCCACTAGGCTGTTTGAAGGCAGAAACCATACAATTTTCTCCCCCTTTGCCTGAGTGGAAATATTCTGCTGTTCAGCGTCTTGGTTATGGAGTTCTCAATAAAGTGGTTTTGGAATTTCCAAGTGTATTTTGGGATGATGCTGTGGATTACTTTGGAGCAACAGCTGAGGAGAGAGGTAAAAGAGGTCACTGCTTTATGTTCTGGAATGTCAGGAAGACAGTTGGCGCTCCTGTCCTTATAGCATTAGTTGTTGGTAAGGCAGCCATAGATGGTCAAAATTTGAACTCTTCTGATCATGTTGAACATGCATTGAAGGTTCTTCGTAAACTTTTTGGGGAAACTTCAGTTCCAGATCCTGTTGCCCATTGCGTAACAGATTGGGGTAGAGATCCTTTTAGCTATGGTGCTTACTCTTATGTTGCCATTGGAGCATCAGGAGAAGACTATGATCTATTAGGGAGGCCAGTTGATAACTGTTTGTTTTTTTCTGGTGAAGCAACAAGCAAAGAACACCCTGATACTGTTGGTGGTGCTATGATGAGTGGACTTCGGGAGGCAGTTCGCATAATTGACATATTGAGCTCTGGTAATGATTATACTGCAGAGGTGGAGGCAATGGAAGCTGCACAGAGGCAGCTAGATACTGAAAGGGATGAAGTTAGGGAGATAACAAAGAAACTTAATGCAGTTGAGCTTTCTAGTTTATTGTACAAGAACTCTTTAGATGGTGCTCAAGCTGTGACCCGGGAAGCTTTATTAAGAGAAATGTTTTTCACTGCAAAAACCAGTGCCGGGCGCCTGCATGTGGCAAAGCAATTGCTAAGTCTTCCTCTTGGAAAGTGGAAATCCTTTGCTGGTAGTAGAGCGGGGCTAACCGTTCTCAACTCATGGATACTGGACTCCATGGGGAAGGATGGAACCCAACTCTTGCGACATTGTGTGCGTCTTCTTGTACGTGTTTCCACTGATCTGCTTGCTGTACGCGTGTCAGGAATAGGAAAAACTGTGAAGGAAAAAGTTTGTGTACATACTAGCCGTGATATTCGTGCTATAGCAAGCCAGTTGGTCAATGTATGGCTTGAAGTTTTCCGCAAGGAAAAAGCTTCTAATGGGGGTTTGAAGTTGTCGAGACAAGCAGCTGCTGTAGATTTATCAAAGAGAAAACCTTTGAAAGACTCTGCCTCAGGAAAGCCACCTTTGAGTACACAGCATGGCATGCTTGAAAATAAAGGAGGTTTGCTGAATCCTGCATCTGCTGGAAGCAATTCACAAGTGAGGAAATCGCACAGCAAACAGGGAAAACAACAAGCAGCAAATGACTCAAGGCATGATGTCAGTTCTTCCAGGTCCCAAGGTTCAATAGACAAAGCTGCTGCAGAGGAGGATAACTATTATGCCTTGACTGAAGAAGAACGGGCTGCCATTGCTGCTGCGGAAGAGGCCCGTGCTAAAGCACATGCTGCTGCTCAGGCATATGCTTCTGCAGAAGCCAGATGCAGTACACTACTACAGCTTCCAAAGATACCTTCCTTCCACAAATTTGCTAAAAAGGAGCATTGTTCACAAAATGATGAATGTGATAGTAGAAGAAAGTGGTCTGGTGGAGTTTTGGGAAGGCAGGATTGTATTTCTGAAATTGATTCAAGGAATTGCAGAGTTAGGGAATGGTCAGTTGATTTCTCTGCTGCATGTGTTAACCTTGAGAATTCCAGAATGTCAGTTGACAACCTTTCACAGAGGAGCCATTCAAATGAGATTGCCAGCCATTTGAATTTCAGAGAGCACTCAGGAGAAAGTGTTGCTGCAGCAGACAGCAGTTTATATACAAAAGCTTGGATTGACACATCTGCTGGTGTGGGTATAAAAGACTCTTATGCCATAGAGAGATGGCAATCTCAAGCAGCTGCAGCTGATTCTTGTTTCTCTCATCCAACCATACATATGGGAGATGAGGAGGATTCAAATGCTCAGTCGATGTTATCCAGTCGGAAGCGTGATGGTTTGGCAAATGAGAGCTCTATTTCACAGGTTACTGTAAATAAGGAGGCCTTAAAAGGTCATCACCGGGGAGCTGATCATATTAAACAGGCTGTTGTGGATTATGTTGCCTCGCTACTTATGCCTCTTTATAAGGCAAGGAAACTAGACAAGGATGGGTACAAGGCTATCATGAAGAAAAGTGCAACAAAGGTCATGGAGGCAGCCACAGATGCTGAAAAAGCAATGATGGTTCATGAGTTTCTAGATTTTAAACGGAAGAACAAGATCCGATCCTTTGTGGATGTATTGATTGAGAGACACATGGCAGCGAAATCAAATGCAAAATCTTAA 5502 0.4284 MDGGDVRAGGKKKRPKPVEIGFDSDDDEPIGSMFKLRKSRGSKKKVGSAASEGSCGDGAKNVDAVTRKLVDAKDDLVGGMDDTLASFRKRLKGSGATRATSSVLNATVESSDRSLDLSVDGIEGHVASDDDVVARGSVRGSKDEKGVNLSVGDRLQHSSDEKMEDSLSAIFRKAQSSSVRKFRGSSGSRKKKESHNGDNKKHGDGCFLVEVTEGICHSNILDVCNEDRQQLSSIQSENFRCASDQERILNDALKQCSSMSHDVEMIDNGSLSKVVEGVSGTEGEVKNKLTDELAPVCNFGSEHGCTSMKKENFLPPCDTEPLVKSTGNISNENNYIVTGKVFSGCQVEVDEGVKSETEVVSDKDCCDYNGLNTKPDVKDLVLGISLEKNDVTASGSLSPKMSVEANESELDVLSNHSKKPLEVYSASILKCNSMLDPVQSDGSSLPSAPDENENNAEYNDSLSDFAYKDSKIRAVRKAKMHKHGDMTYEGDADWENLTNDQALNENHAAEDSESVAVVAVSAGLRAHAAGPMEKIKFKEMLKRKGGLKEYLACRNQILSLWSRDVTRVLPLAECGVSDAQSEDKSPRSSLTRDVYTFLDQCGYINIGIASQKDVGSSAMHSYKLVKEKGFEESSTASIADSEEGVSFIVGQTKMSDVSMENNHGLKREDEDVPAEATEGRNAATINLLNTKQPKGENFDSQDNDEIQEGLGGTRHVNINNVVPSSKFPDCRLASAVATEQSNESICVKTVSADRIGDQMLSDSEARKRVIVIGAGPSGLTAARHLQRQGLTVTVLEARNRIGGRVFTDRSSLSVPVDLGASIITGVEADVATERRPDPSSLVCSQLGLELTVLNSDCPLYDIMTGQKVPADMDEALEAEYNSLLDGMELLVAQKGEQAMRMSLEDGLEYALKIRRLAHAGSGEEIEQVNSGDSPLDSKKVSTVEKKFEQDILSPLERRVMDWHYAHLEYGCAASLTEVSLPNWNQDDVYGGFGGAHCMIKGGYSAVVESLAEGLPIQLNHVVTNVSYDIEEPGCCSKVKVSTSDGSEFFGDAVLITVPLGCLKAETIQFSPPLPEWKYSAVQRLGYGVLNKVVLEFPSVFWDDAVDYFGATAEERGKRGHCFMFWNVRKTVGAPVLIALVVGKAAIDGQNLNSSDHVEHALKVLRKLFGETSVPDPVAHCVTDWGRDPFSYGAYSYVAIGASGEDYDLLGRPVDNCLFFSGEATSKEHPDTVGGAMMSGLREAVRIIDILSSGNDYTAEVEAMEAAQRQLDTERDEVREITKKLNAVELSSLLYKNSLDGAQAVTREALLREMFFTAKTSAGRLHVAKQLLSLPLGKWKSFAGSRAGLTVLNSWILDSMGKDGTQLLRHCVRLLVRVSTDLLAVRVSGIGKTVKEKVCVHTSRDIRAIASQLVNVWLEVFRKEKASNGGLKLSRQAAAVDLSKRKPLKDSASGKPPLSTQHGMLENKGGLLNPASAGSNSQVRKSHSKQGKQQAANDSRHDVSSSRSQGSIDKAAAEEDNYYALTEEERAAIAAAEEARAKAHAAAQAYASAEARCSTLLQLPKIPSFHKFAKKEHCSQNDECDSRRKWSGGVLGRQDCISEIDSRNCRVREWSVDFSAACVNLENSRMSVDNLSQRSHSNEIASHLNFREHSGESVAAADSSLYTKAWIDTSAGVGIKDSYAIERWQSQAAAADSCFSHPTIHMGDEEDSNAQSMLSSRKRDGLANESSISQVTVNKEALKGHHRGADHIKQAVVDYVASLLMPLYKARKLDKDGYKAIMKKSATKVMEAATDAEKAMMVHEFLDFKRKNKIRSFVDVLIERHMAAKSNAKS 1833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00083 1833 MobiDBLite consensus disorder prediction 1472 1511 - -
Aip06g00083 1833 MobiDBLite consensus disorder prediction 178 203 - -
Aip06g00083 1833 Pfam Flavin containing amine oxidoreductase 777 1247 IPR002937 GO:0016491
Aip06g00083 1833 PANTHER LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3 465 1829 - -
Aip06g00083 1833 Pfam SWIRM domain 530 605 IPR007526 GO:0005515
Aip06g00083 1833 Gene3D - 514 617 IPR036388 -
Aip06g00083 1833 PANTHER FLAVIN MONOAMINE OXIDASE 465 1829 - -
Aip06g00083 1833 SUPERFAMILY Homeodomain-like 513 610 IPR009057 -
Aip06g00083 1833 MobiDBLite consensus disorder prediction 1708 1729 - -
Aip06g00083 1833 MobiDBLite consensus disorder prediction 439 460 - -
Aip06g00083 1833 MobiDBLite consensus disorder prediction 189 203 - -
Aip06g00083 1833 MobiDBLite consensus disorder prediction 1702 1729 - -
Aip06g00083 1833 MobiDBLite consensus disorder prediction 681 703 - -
Aip06g00083 1833 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 1347 1429 IPR035441 -
Aip06g00083 1833 Gene3D - 769 1245 IPR036188 -
Aip06g00083 1833 Gene3D - 875 1202 - -
Aip06g00083 1833 PRINTS Adrenodoxin reductase family signature 768 790 - -
Aip06g00083 1833 PRINTS Adrenodoxin reductase family signature 791 804 - -
Aip06g00083 1833 MobiDBLite consensus disorder prediction 1441 1514 - -
Aip06g00083 1833 MobiDBLite consensus disorder prediction 135 163 - -
Aip06g00083 1833 MobiDBLite consensus disorder prediction 1 60 - -
Aip06g00083 1833 ProSiteProfiles SWIRM domain profile. 515 615 IPR007526 GO:0005515
Aip06g00083 1833 Coils Coil 1535 1555 - -
Aip06g00083 1833 MobiDBLite consensus disorder prediction 682 696 - -
Aip06g00083 1833 Coils Coil 1256 1290 - -
Aip06g00083 1833 SUPERFAMILY FAD/NAD(P)-binding domain 766 1249 IPR036188 -
Aip06g00083 1833 SUPERFAMILY FAD-linked reductases, C-terminal domain 1085 1196 - -
Aip06g00083 1833 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00083 Aip-Chr6 789979 799376 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI or SNF-SWI3 Aip06g00083 Amino_oxidase 5.6e-107 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00083 06 789979 799376 Aip06g00083 06 789979 799376 ECH