Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00082 ATGGGCACAGGCAGTATATCAGTTCTGATTCTCCTTGTTTTGGTGGGCGGAGACACCGCCTTGTCCGGCGGCGGAGAATGGCAGCTCCTTCAAAAGAGCATAGGCATAGTGGGAATGCACATGCAGCTTCTCCAAAACGACCACATTGTGATATACGACCGCACCGATTTCGGCCTCTCAAACCTCTCTTTACCGAACAACCGTTGCCGCCATAACCAGAGGGAGATGGTTGTCACCATAGACTGCACTGCTCACTCCGTCGAATACGACGTCGTTTCCAACACCTTCAGGCCACTCTTTGTTCAGACTGATGTCTGGTGCTCTTCCGGTTCGGTTTCGCCCAACGGAACTCTTGTTCAGACCGGAGGATTCAACGACGGCGACCGCGCCGTTCGCACCTTCTCGCCGTGTTCGCCAAATGCTACTTGCGACTGGATAGAATTTCCCGGCCAACTCTCCGTCCGCCGGTGGTATGCCACCAACCAAAAGCTACCGGACGGTGGACAAATTGTGATTGGTGGCCGGCGACAATTCAACTATGAATTTTACCCAAACAATGATTTATTAGCAACACAACACATTCATAGTTTACCATTCCTTGTTCAAACAAACGACATTGGAGCAGAGAACAATTTATACCCTTTCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATGTGGAAGCTGAGGTTTTGGTTTGTGGTGGAGCCCCAAAAAATTCTTTTAAGTATGCTAGGGCGGGTCGGTTTTTCGGAGCTTTGAATACATGCGGTCGGATTAAAATTACCGACCCGAATCCAAAATGGGTTATGGAGACAATGCCTAAGGGTAGGGTCATGAGTGACATGATTATGCTTCCAAACGGCAACGTTTTGATTATAAACGGAGCCGGTTCGGGTACTGCCGGTTGGGGATATGCCCGCGATCCGATTTTGAACCCGTTTCTCTACAAAACGGATAATCCAATTGGGTCAAGATTTGAAGTCCAAAATCCAACTACTATTCCACGTATGTACCATTCAACAGCAATTTTGGTTCGTGATGGTAGGGTTATAGTGGCGGGAAGCAACCCTAATAAGTATTACAATTTCACCAACGTGTTGTTTTTTACTGACTTGAGCGTCGAAGCATTTTCTCCTTCTTATTTGGAACCCGCTTTTGATCATTTACGACCTAGAATTATGTCACAATTTCAAGACCAATTGATTTATGGTCAAATGTTGAGGGTGCAATTTCAAGTGGAAGCAATGTTGGCTCAAGATTTGTTGTATGTGACAATGTTGGCGCCACCTTTTAACACACACTCGTTCTCAATGAATCAAAGATTATTGGTGTTGGAGAAAATTAATGTTACTAAGGTTTTTGGGGCATCAACTTATGAAATTGAGGTTACCACACCAAAGTCACCAATTCTTGCACCACCCGGTTTCTACATAATATTTGTGGTACACCAACAAATTCCTAGTGAGGGTATTTGGGTCCAAATACTTTGA 1512 0.4392 MGTGSISVLILLVLVGGDTALSGGGEWQLLQKSIGIVGMHMQLLQNDHIVIYDRTDFGLSNLSLPNNRCRHNQREMVVTIDCTAHSVEYDVVSNTFRPLFVQTDVWCSSGSVSPNGTLVQTGGFNDGDRAVRTFSPCSPNATCDWIEFPGQLSVRRWYATNQKLPDGGQIVIGGRRQFNYEFYPNNDLLATQHIHSLPFLVQTNDIGAENNLYPFXXXXXXXXXXXXXXXXYVEAEVLVCGGAPKNSFKYARAGRFFGALNTCGRIKITDPNPKWVMETMPKGRVMSDMIMLPNGNVLIINGAGSGTAGWGYARDPILNPFLYKTDNPIGSRFEVQNPTTIPRMYHSTAILVRDGRVIVAGSNPNKYYNFTNVLFFTDLSVEAFSPSYLEPAFDHLRPRIMSQFQDQLIYGQMLRVQFQVEAMLAQDLLYVTMLAPPFNTHSFSMNQRLLVLEKINVTKVFGASTYEIEVTTPKSPILAPPGFYIIFVVHQQIPSEGIWVQIL 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00082 503 Gene3D - 23 220 IPR037293 -
Aip06g00082 503 CDD E_set_GO_C 393 502 IPR015202 -
Aip06g00082 503 Pfam Galactose oxidase-like, Early set domain 397 502 IPR015202 -
Aip06g00082 503 Gene3D - 224 392 IPR037293 -
Aip06g00082 503 SUPERFAMILY Galactose oxidase, central domain 87 390 IPR011043 -
Aip06g00082 503 SUPERFAMILY E set domains 393 502 IPR014756 -
Aip06g00082 503 PANTHER OXIDASE, PUTATIVE, EXPRESSED-RELATED 231 502 - -
Aip06g00082 503 PANTHER OXIDASE, PUTATIVE, EXPRESSED-RELATED 22 216 - -
Aip06g00082 503 PANTHER SECRETED PROTEIN-RELATED 231 502 - -
Aip06g00082 503 PANTHER SECRETED PROTEIN-RELATED 22 216 - -
Aip06g00082 503 Gene3D Immunoglobulins 396 503 IPR013783 -
Aip06g00082 503 Pfam Glyoxal oxidase N-terminus 39 216 IPR009880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00082 Aip-Chr6 781703 784201 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00082 06 781703 784201 Aip06g00082 06 781703 784201 ECH
Aip06g00082 06 781703 784201 Aip07g02459 07 103153883 103155046 PCT