Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00075 ATGGAATCTTTTGATCAAAGAAACAATAGTGGAGTATTTGGTTCTTCAGCTGCAGTTCCTAGACCACCATCGAACAATAACAGATTGAATGCTTTTAATCAGATGGGTGCAGGTGGCTCTGAGAATCCGAAGCCGGGTATTGGTATACCGCCATCACACCCTAGTACCAATTTGCCATATTCTCAGTATATAGCTTCTCAAAACCAACACCATTTAGGTTCTCAGAGACTGCGTTCGCCCAATTTGAGCCCAGGGTCATCATCATCTTCGTCGCATTCGAGGTCTATGTCCCAACCCTCATTCTTTTCCCTTGATTCCTTGCCACCATTGAGCCCTTTGACTTATCGAGACCCTGTTGCTTCTCCGGTGCCAGCTGCAACCTCTTTTGGTGATTCGGTCGCAATGGATGTGTCTATGGAGGAAAATTTAGGTTCTACTCATACTGCGCCATCTTTGACCGCCAACAGAGGTCATAGTCTTCCTCCTCGCAAGGGGCACAGGCGCAGCAATAGTGATTCCCCTTTAGGAATATCCGGTCTTGTTCAATCTTATTCTCAGTCAGTTCCTACTAAGAATGTGAGCGACCGGGACAATTTGGTCTCCAAAGGAGAAAACACTGGTTTTGAGAAGCCAATTCAGTTAGTTTTAAAGGAGCCAAGTAAGGATATGGTCCATTTTGACTGCTTTACTGGAGAAGCTATGGGCAAGAAAGAGGATTGCATAGATGATTTATTTAATGCGTACATGAATTTGGATAACATACAAAATATGAACTTTCCTGGCATGGAAGATAAGGATTTGGATAGCAGAACTAGTGGTTCAAAGACGGTTGAAAGTAGTGACAATGAAGTAGAAAGTCATGCGAATGGAAAGACAACTTATGCTCAGGGAGCAACTTCAAGCTATAAAGAAGAACGGAAGGAGGGTATCAAGAGGGGTTCTAGTGGAGACATTGCACCGGTAGGCCGACACCGGAGAAGCTTTTCATTGGATAGTTCCATCGGGGATTTTCAGCTTGAAGATGAATCTTCTAAGCTGCCTCCTTTGCAAAATCGATTTGGTCAACACTCGCCTAGCAATTCAATAGATGGTAAAACATCTGACACCAGTATAGAGTTTGTAAAGCGTGAATTCAGCTCAGATGAGTTAAAGAAAATAATGGAAAGTGACAAGCTCACTGAGATTGCCATGGCGGATCCAAAGCGTGCAAAACGGATTTTGGCTAATCGTGTCTCAGCTGCTCGGTCAAAGGAAAGGAAAACACGATATATTTCTGAACTGGAGCATAAGGTGCAAACTCTTCAGGCAGAAACAACCTCATTGTCTACTCAATTTACTAAACTACAGATGGATAATTCAGAGCTTAAAAGTTTGAATAATGAGTACAAATTGAAGCTTCAAGCCTTGGAACAACAGTCCCAACTGAAAGATGCTTTGAATGAGACCTTGGATGCTGAAGTTCGGCGATTAAGGCGCACTGTCGCAAATCTTGGTGGAGATCCCCTCCTCTAA 1512 0.4332 MESFDQRNNSGVFGSSAAVPRPPSNNNRLNAFNQMGAGGSENPKPGIGIPPSHPSTNLPYSQYIASQNQHHLGSQRLRSPNLSPGSSSSSSHSRSMSQPSFFSLDSLPPLSPLTYRDPVASPVPAATSFGDSVAMDVSMEENLGSTHTAPSLTANRGHSLPPRKGHRRSNSDSPLGISGLVQSYSQSVPTKNVSDRDNLVSKGENTGFEKPIQLVLKEPSKDMVHFDCFTGEAMGKKEDCIDDLFNAYMNLDNIQNMNFPGMEDKDLDSRTSGSKTVESSDNEVESHANGKTTYAQGATSSYKEERKEGIKRGSSGDIAPVGRHRRSFSLDSSIGDFQLEDESSKLPPLQNRFGQHSPSNSIDGKTSDTSIEFVKREFSSDELKKIMESDKLTEIAMADPKRAKRILANRVSAARSKERKTRYISELEHKVQTLQAETTSLSTQFTKLQMDNSELKSLNNEYKLKLQALEQQSQLKDALNETLDAEVRRLRRTVANLGGDPLL 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00075 503 MobiDBLite consensus disorder prediction 286 300 - -
Aip06g00075 503 MobiDBLite consensus disorder prediction 171 201 - -
Aip06g00075 503 MobiDBLite consensus disorder prediction 1 37 - -
Aip06g00075 503 ProSiteProfiles GGDEF domain profile. 443 503 IPR000160 -
Aip06g00075 503 MobiDBLite consensus disorder prediction 344 366 - -
Aip06g00075 503 SMART brlzneu 397 461 IPR004827 GO:0003700|GO:0006355
Aip06g00075 503 MobiDBLite consensus disorder prediction 144 205 - -
Aip06g00075 503 MobiDBLite consensus disorder prediction 1 119 - -
Aip06g00075 503 Coils Coil 417 444 - -
Aip06g00075 503 Gene3D - 400 463 - -
Aip06g00075 503 MobiDBLite consensus disorder prediction 54 107 - -
Aip06g00075 503 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 72 502 - -
Aip06g00075 503 MobiDBLite consensus disorder prediction 259 324 - -
Aip06g00075 503 CDD bZIP_plant_RF2 402 452 IPR044759 GO:0003700|GO:0006355
Aip06g00075 503 Coils Coil 452 489 - -
Aip06g00075 503 PANTHER BZIP TRANSCRIPTION FACTOR 72 502 - -
Aip06g00075 503 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 399 462 IPR004827 GO:0003700|GO:0006355
Aip06g00075 503 Pfam bZIP transcription factor 401 459 IPR004827 GO:0003700|GO:0006355
Aip06g00075 503 SUPERFAMILY Leucine zipper domain 401 457 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00075 Aip-Chr6 743581 746375 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aip06g00075 bZIP_1 2.2e-11 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00075 06 743581 746375 Aip06g00075 06 743581 746375 ECH