Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00069 ATGGCTTCCTTAGAAGAAAAGGTTAAAACTTGTGGTGTTGGTGTTGTTGGGGGTCAAACTCTAGTTGCTGAGATGAAGCTCCTCAAGGAAATGCAAGAGCACTCTGGGGTGAGAAAGACTTTGAATTCAGAACTGTGGCATGCTTGTGCTGGCCCTCTTGTCTCTTTGCCTCAAGTGGGAAGTCTTGTTTATTACTTTCCCCAGGGACATAGTGAGCAGGTGGCAGCTTCCACCAGAAGAACAGCAACATCTCAGATTCCAAACTATCCAAACCTTCCATCTCAGTTGCTCTGCCAAGTTCAAAATGTCACACTTCATGCAGACAAAGATACAGATGAAATCTATGCTCAAATGAGTCTCCAGCCCTTGAATTCGGAGAAAGATGTGTTTCCTATATCTGATTTTGGCCTAAAGCACAGCAAGCATCCAACTGAGTTTTTCTGCAAAACTTTGACTGCAAGTGACACCAGCACACACGGCGGTTTCTCAGTTCCACGGAGGGCGGCAGAAAAGCTCTTTCCTCCACTGGACTACACAATTCAGCCTCCAACACAAGAACTAGTTGTCCGTCAGCCCAAGAGACACCTTTTAACAACAGGATGGAGTTTATTTGTCGGATCAAAAAGGCTTAGAGCAGGGGATTCTGTTCTATTTATCAGGGATGAGAAATCGCAACTGCGAGTTGGTGTTAGGCGTGTTAATCGCCAACAAACAACATTGCCATCATCAGTTCTTTCTGCTGATAGCATGCACATTGGTGTGCTTGCTGCTGCAGCTCACGCGGCTTCTAACCGAATTCCTTTCACTATTTTCTATAATCCAAGGGCATGCCCTTCAGAATTTGTTATTCCACTTGCTAAGTACCGAAAATCTGTATATGGGACACAACTCTCAGTTGGCATGAGATTTGGTATGATGTTTGAGACAGAAGAATCCGGTAAGCGCAGGTATATGGGTACAATAGTTGGTATCAGTGACTTGGATCCTTTGAGATGGCCTGGTTCTAAGTGGCGAAATATTCAGCAGGTGGAGTGGGATGAACCAGGATGTGGTGACAAGCAGAATAGAGTTAGTGTATGGGAAATTGAGACTCCTGAAAGCCTTTTTATATTTCCTTCTTTAACTTCGAGTCTAAAACGGCCATTACAGTCTGGATTTTTGGAAAACGACTGGGGAGCTTTGATACGAAGACCATATATAAGAGTTCCTGAAAACGGTGCAACGGAGCTGGCGAATTCAATGCCAAATATCTACTCTGAACACCTGATGAAAATGCTTTTGAAGCCACAACTTATTAACAATAATGGAGCCATGGCCATGCAACAAGAATCTGTTGCTATGAGAGGTACTCTACAAGATGCAAAGACCACACAGGCACCAGAGAACCATAAAGTTAATCTTGCTAGTACAGAGAACCTGCCACTGAAAAATTTGTATTCTCAATCTGTTCCTGACCAAGCTAATGTCGTGAACTTACATTCTCAAGCGAAAAATGATAACCATATGTCTTCTGGAACAGTTATTGATAAGCCGAAGCTCGAACCTGAGGTATTAAATGATCAAATGTATGAGATTCCATCTGCAGGAACAGGAACCAACATTGAAAAAGTGGCCTCAAATCCTGCTAACTCTCAAAGTGTTGCGAACCAATTGGCATTCCTTAATCAAAACCAGAGTCAGTCACTTGCGCAATCCGGTTCATGGCCTATACAACCTCAGTTAGAATCATCGGTATCCCATCCTCAACTTGTTGACATGCCTCAAGGTGATTCTGCAATTGCAAACAGCATGCTTCCTCAGCTAGACATTGATGAATGGATGGTGTATTCTTCTAACCAAACTTTTGCTAACCAAAACCGATCAACTGGGCCGGTATCAGATTTTCAAGAGCATTCTGCCGCACTTCAACCTCAAGTAGTGAATCCTCCCATGCCAATGAACCAAGAAGTGTGGGATCAATATGTCAAGAATTTTAAGCTTTTGTCTCAAGTAGACCAGCTGACATCTGTCTGTCAGCCGGGGATGTACAGCCTCAACGGTATATCGAGTTCAAACAATTTGAGGGATCTTTCAGCAGAGAGCAATAATCAAAGTGAAATTTGTGTCGATGTTAGTAATAGTGTAAATACAACCATGGTTGATCCTTCAACTTCAAGCACCATTTTGGATGAGTATTGCACTCTGAAGGAGAGGGATTTCCAGAATCCACAAGATTGCATCGTCGGCAACTTAAGTTCTAGCCAGGATGTCCAGTCTCAGATAACCTCTGCAAGTCTAACTGAGTCACATGCCTTTCCTCTGCAAGACAACTCAGGTGGTACATCTTCAAGTCATGTTGATTTTGATGAAAGCAGCTTTCTGCAGAATAACTCATGGCAACCAGTTGCTGCGCCCGTGCGAACCTACACTAAGGTGCAAAAGGCAGGATCTGTAGGAAGATCAATTGATGTCACAACTTTCAAGAACTACGAAGAGCTGATCCGCGCGATTGAATGCATGTTTGGACTAGATGGTCTGCTGAATGACACCAAAGGTTCCGGCTGGAAACTGGTGTATGTGGATTATGAGAGTGATGTTCTTCTTGTTGGGGATGATCCTTGGGAGGAATTTGTCGGCTGCGTTCGATGCATCAGAATCTTATCGCCTTCAGAAGTTCAACAGATGAGTGAAGAGGGAATGAAGCTTCTCAACAGTGGAGCCTTGCAAGGGATCAATGTTTGA 2721 0.4362 MASLEEKVKTCGVGVVGGQTLVAEMKLLKEMQEHSGVRKTLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPNLPSQLLCQVQNVTLHADKDTDEIYAQMSLQPLNSEKDVFPISDFGLKHSKHPTEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTIQPPTQELVVRQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLRVGVRRVNRQQTTLPSSVLSADSMHIGVLAAAAHAASNRIPFTIFYNPRACPSEFVIPLAKYRKSVYGTQLSVGMRFGMMFETEESGKRRYMGTIVGISDLDPLRWPGSKWRNIQQVEWDEPGCGDKQNRVSVWEIETPESLFIFPSLTSSLKRPLQSGFLENDWGALIRRPYIRVPENGATELANSMPNIYSEHLMKMLLKPQLINNNGAMAMQQESVAMRGTLQDAKTTQAPENHKVNLASTENLPLKNLYSQSVPDQANVVNLHSQAKNDNHMSSGTVIDKPKLEPEVLNDQMYEIPSAGTGTNIEKVASNPANSQSVANQLAFLNQNQSQSLAQSGSWPIQPQLESSVSHPQLVDMPQGDSAIANSMLPQLDIDEWMVYSSNQTFANQNRSTGPVSDFQEHSAALQPQVVNPPMPMNQEVWDQYVKNFKLLSQVDQLTSVCQPGMYSLNGISSSNNLRDLSAESNNQSEICVDVSNSVNTTMVDPSTSSTILDEYCTLKERDFQNPQDCIVGNLSSSQDVQSQITSASLTESHAFPLQDNSGGTSSSHVDFDESSFLQNNSWQPVAAPVRTYTKVQKAGSVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMSEEGMKLLNSGALQGINV 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00069 906 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 28 904 IPR044835 GO:0003677|GO:0006355|GO:0009725
Aip06g00069 906 ProSiteProfiles B3 DNA-binding domain profile. 194 234 IPR003340 GO:0003677
Aip06g00069 906 Pfam B3 DNA binding domain 147 233 IPR003340 GO:0003677
Aip06g00069 906 ProSiteProfiles PB1 domain profile. 800 884 IPR000270 GO:0005515
Aip06g00069 906 SUPERFAMILY CAD & PB1 domains 804 879 - -
Aip06g00069 906 SMART B3_2 147 234 IPR003340 GO:0003677
Aip06g00069 906 Gene3D - 144 233 IPR015300 -
Aip06g00069 906 Pfam Auxin response factor 258 341 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Aip06g00069 906 PANTHER AUXIN RESPONSE FACTOR 5 28 904 - -
Aip06g00069 906 Pfam AUX/IAA family 797 887 IPR033389 -
Aip06g00069 906 SUPERFAMILY DNA-binding pseudobarrel domain 135 261 IPR015300 -
Aip06g00069 906 CDD B3_DNA 146 232 IPR003340 GO:0003677
Aip06g00069 906 Gene3D - 796 889 - -
Aip06g00069 906 Gene3D - 296 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00069 Aip-Chr6 692689 697310 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Aip06g00069 AUX_IAA 4.6e-11 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00069 06 692689 697310 Aip06g00069 06 692689 697310 ECH