Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00057 ATGGCCCTCCTAGCACTCTTGCCTGAACACTCCCTTCCCAACAACAACAATGGTAAGACTAAGATTAATAATAATAAGCAGAAGCAGAAACACAAGCAGAATCAAAAGCAGAAGCAGAAAGAAAAACAAGCTTCTTCTTCTTCTTCTTCATCTTCATGGGAGCAAATCAAGAACTTGATATCTTGCAAACAAGTTGAAGGGTCAAGAGTGCATGATCCTTCAGCGTCAAAGAGCACGATGGGTTCATCTTGCAGCTCCATATGCAGCTTCAGAGATGTTGTTCATGGAAACACTAGAGTTGTTCATAGAGCTGATAACTCTTCACCTGAGAGTAGCTCACTTGGCCAGCAAGAAACTGGTTTGTTGAGTAGAAAACCTGCCGCAAAATCATCAAGAAGGTCATCATCATCTTCATCTGGGAAATCCAATGGTGGAGCAACCTACACGCCATCATCTTCTAGAGGGATGCAGTTTAGGAAGCTGTCTGGGTGTTATGAATGGTCAAGAGTGCATGATCCTTCAGCGCTACCAATTCCAAGGAGCAGCGTGTGTGCTTGTTCACAGTGTGGAGAGGTGTTCCCTAAGATGGAAAGCTTAGAGCTTCATCAAGCTGTTCGTCATGCTGTTTGGGAGCTGGGTCCAGAGGATTCAGGTCGGAACATAGTGGAAATAATCTTCAAATCAAGCTGGCTAAAGAAGGACAACTCGATATGCAAGATCGAACGGATACTGAAGGTTCAGAACAGTCAACGCACCATCCAACGGTTTGAGGAGTGCAGGGACAGCGTGAAGTCGCGTGCACAGAATAGTAGCAAGAAAAACCCCAGGTGCGCAGCCGATGGCAACGAACTCTTGAGGTTCCATTGCACCACATTGACCTGCCCACTTGGGGCACAGGGATCCACTGCCCTTTGCACTGCCATTCCTGGTTGTGGCGTATGCACTGTCATAAGGCACGGGTTTCAAGGCGGTGGAAAGGGGGTGAAGACCACGGCCAGTAGCGGTAGGGCACATGACTCGCTGGCAGGGCATTGTGGCGCCCCAAGGGCAATGTTGGTTTGCCGTGTCATTGCTGGCAGGGTCAGGCGCGTGCCAGAGGACGCGCCGCCAGAGGACGACGGAGTCTCGGCTAGTGGGGGCTATGATTCTTTTGCAGGCAGTGCCGGGATCTACTCTAACCTTGAAGAGTTGGTTGTTTTCAACCCACGCGCCATCCTACCCTGTTTTGTGGTTGTTTACAAGGTGCTTTCTTGTTGA 1257 0.4932 MALLALLPEHSLPNNNNGKTKINNNKQKQKHKQNQKQKQKEKQASSSSSSSSWEQIKNLISCKQVEGSRVHDPSASKSTMGSSCSSICSFRDVVHGNTRVVHRADNSSPESSSLGQQETGLLSRKPAAKSSRRSSSSSSGKSNGGATYTPSSSRGMQFRKLSGCYEWSRVHDPSALPIPRSSVCACSQCGEVFPKMESLELHQAVRHAVWELGPEDSGRNIVEIIFKSSWLKKDNSICKIERILKVQNSQRTIQRFEECRDSVKSRAQNSSKKNPRCAADGNELLRFHCTTLTCPLGAQGSTALCTAIPGCGVCTVIRHGFQGGGKGVKTTASSGRAHDSLAGHCGAPRAMLVCRVIAGRVRRVPEDAPPEDDGVSASGGYDSFAGSAGIYSNLEELVVFNPRAILPCFVVVYKVLSC 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00057 418 Coils Coil 22 44 - -
Aip06g00057 418 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 36 417 - -
Aip06g00057 418 MobiDBLite consensus disorder prediction 1 84 - -
Aip06g00057 418 MobiDBLite consensus disorder prediction 40 62 - -
Aip06g00057 418 ProSitePatterns Zinc finger C2H2 type domain signature. 184 207 IPR013087 -
Aip06g00057 418 Gene3D - 209 415 - -
Aip06g00057 418 MobiDBLite consensus disorder prediction 102 154 - -
Aip06g00057 418 ProSiteProfiles Zinc finger C2H2 type domain profile. 184 208 IPR013087 -
Aip06g00057 418 SUPERFAMILY ADP-ribosylation 209 414 - -
Aip06g00057 418 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 36 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00057 Aip-Chr6 513625 518793 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aip06g00057 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00057 06 513625 518793 Aip06g00057 06 513625 518793 ECH