Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00054 ATGTCAGTTATTGCCGTTGGATCATTCCTCCCGCCACCGCCGCCGTACCGGAGGATCAAGCCTCGCTTCACGACCATGGTGTCTCTCCGATCCGACGCTGTATCGGTTGCAGAAACAAGCAGCATATTGAGGAAGCTGAAGGAAGAGTGCGCCACGCCTCTTCCTGTACTTCGTCAAGTGGCGGATGCCATGTCAGCTGACATGAGAGCTGGCCTCGCCGCCGCACACGGCCTTCCCATGATACCCTCCTTCGTTGAGGATCTTCCCACTGGGAATGAGAAGGGATTGTTCTATGCTTTGGACCTTGGTGGAACCAACTTCCGTGTGCTGAGGGTGCAGTTGGGCGGAAAGGATGAGCGTGTCGTCGCCACCGACTTCGACCAAGTGTCCATACCTCCTCAGCTTATGTCTGCTACATGTGAGGAGCTTTTTGATTTCATTGCTTTAGGACTAGCAAAACTCGCGGCAAAAGATGATGATAGATTGAATTTGTCGCCTGGAAAGAAGGGAGAAATCGGGTTCACTTTTTCATTTCCAGTGAGGCAGACATCTATTGACTCCGGCATACTAGTCAAGTGGACCAAAGGTTTTGCAGTCAGTGGAGCAGCAGGAAGAGATGTGGTTGCTTGTTTGAATGAGGCTATGGAGAGGCAAGGACTAGATATGCGAGTCTCTGCGCTGGTGAATGATGCTGTGGCAACATTAGCTGGAGCAGAATATTGGGACAATGATGTTGCGGTTGCTATCATTTTAGGTACCGGAACCAATGCCTGCTATGTTGAGCAAATTGATGCCATTCCTAAGTTACAAGGTCATGTCTCCTCTTCTGGGAAAATGAATGTTGCTGAGTGGGGAGCATTCTCAAAACGTCTCCCTTTAACTGAGTTTGATAGAGCGATGGATGCTGCTAGTATCAACCCTGGTGAGCAGATCTTTGAAAAGACAATCTCAGGAATGTATCTAGGGGAAATTGTGAGACTAGTGCTTTTGGAAATGGCTGCAACTGGTGAATTGTTTGGGAAATCAATCCCAGAAAATCTATATACGCCTTTCATACTTGGGACCCCAGATCTATGTGCCATGCAGCAGGACAATTCAGGTGATTTACAAGGCGTTGGGTCCCTCCTCTATGATAAAGCAAGGGTTGAGTCCACTTTTAGTGCAAGGAAAACCGTTTTAGAGGTTTGTGACACAATTGTGAAGCGGGGTGGAAGCTTAGCAGGTGCAGGAATTGTGGGGATTCTGCAAAAAATGGAGGAGGATTCAAAAGGAGTGATCTTTGGGAAGAGAACAGTTGTGGCCATTGATGGAGGCTTATATGAAAATTACCCTCAATACAGGACATATATGCAAGATTCGGTCAAAGAGCTCATAGGATCAGAGAAGTCAAACAATTTGGTAATTGAACATTCAAAAGATGGATCTGGCATAGGTGCTGCTCTTTTGGCAGCTTCAAACTCCATGTACAAGCATGACTTCTAG 1482 0.4723 MSVIAVGSFLPPPPPYRRIKPRFTTMVSLRSDAVSVAETSSILRKLKEECATPLPVLRQVADAMSADMRAGLAAAHGLPMIPSFVEDLPTGNEKGLFYALDLGGTNFRVLRVQLGGKDERVVATDFDQVSIPPQLMSATCEELFDFIALGLAKLAAKDDDRLNLSPGKKGEIGFTFSFPVRQTSIDSGILVKWTKGFAVSGAAGRDVVACLNEAMERQGLDMRVSALVNDAVATLAGAEYWDNDVAVAIILGTGTNACYVEQIDAIPKLQGHVSSSGKMNVAEWGAFSKRLPLTEFDRAMDAASINPGEQIFEKTISGMYLGEIVRLVLLEMAATGELFGKSIPENLYTPFILGTPDLCAMQQDNSGDLQGVGSLLYDKARVESTFSARKTVLEVCDTIVKRGGSLAGAGIVGILQKMEEDSKGVIFGKRTVVAIDGGLYENYPQYRTYMQDSVKELIGSEKSNNLVIEHSKDGSGIGAALLAASNSMYKHDF 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00054 493 Gene3D - 83 483 - -
Aip06g00054 493 PRINTS Hexokinase family signature 247 261 - -
Aip06g00054 493 PRINTS Hexokinase family signature 224 240 - -
Aip06g00054 493 PRINTS Hexokinase family signature 469 485 - -
Aip06g00054 493 PRINTS Hexokinase family signature 172 197 - -
Aip06g00054 493 PRINTS Hexokinase family signature 310 332 - -
Aip06g00054 493 PRINTS Hexokinase family signature 392 414 - -
Aip06g00054 493 PRINTS Hexokinase family signature 98 114 - -
Aip06g00054 493 Pfam Hexokinase 43 240 IPR022672 GO:0005524|GO:0005975|GO:0016773
Aip06g00054 493 Gene3D - 63 472 - -
Aip06g00054 493 Pfam Hexokinase 247 484 IPR022673 GO:0005524|GO:0005975|GO:0016773
Aip06g00054 493 SUPERFAMILY Actin-like ATPase domain 36 242 IPR043129 -
Aip06g00054 493 ProSiteProfiles Hexokinase domain profile. 37 484 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Aip06g00054 493 SUPERFAMILY Actin-like ATPase domain 244 487 IPR043129 -
Aip06g00054 493 PANTHER HEXOKINASE 29 489 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Aip06g00054 493 CDD NBD_sugar-kinase_HSP70_actin 99 261 - -
Aip06g00054 493 ProSitePatterns Hexokinase domain signature. 172 197 IPR019807 GO:0004396|GO:0005524|GO:0006096
Aip06g00054 493 PANTHER HEXOKINASE-LIKE 1 PROTEIN-RELATED 29 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00054 Aip-Chr6 493698 496855 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00054 06 493698 496855 Aip06g00054 06 493698 496855 ECH