Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00053 ATGATCCGATTCATTCTGCTGCAGAACAGGCAGGGGAAAACCCGTTTGGCGAAATACTATGTCCCTCTCGAGGATTCCGAGAAGCACAAGGTCGAATACGAGGTTCATCGCCTCGTTGTTAATCGAGACCCCAAATACACTAACTTCGTTGAGTTTAGGACTCACAAGGTAATATATAGGAGATATGCTGGCTTGTTCTTCTCTCTATGTGTTGACATTACTGATAATGAGCTTGCTTACTTGGAGTGCATCCATCTATTTGTGGAGATTTTGGATCACTTCTTTAGCAATGTGTGTGAGCTTGACTTGGTCTTCAACTTCCATAAGGTTAGTTTGTTAATGGTTTTTTTTATCACTTATCTTTCTTGTTGTACTTGGATTTCAGCTCAACTTTTCATGAATGTGTTCTATGTTGGTCTTTGA 423 0.4019 MIRFILLQNRQGKTRLAKYYVPLEDSEKHKVEYEVHRLVVNRDPKYTNFVEFRTHKVIYRRYAGLFFSLCVDITDNELAYLECIHLFVEILDHFFSNVCELDLVFNFHKVSLLMVFFITYLSCCTWISAQLFMNVFYVGL 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00053 140 PANTHER AP COMPLEX SUBUNIT SIGMA 2 118 - -
Aip06g00053 140 PANTHER ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY 2 118 IPR016635 GO:0015031
Aip06g00053 140 Gene3D - 1 120 - -
Aip06g00053 140 SUPERFAMILY SNARE-like 1 114 IPR011012 -
Aip06g00053 140 Pfam Clathrin adaptor complex small chain 1 114 IPR022775 -
Aip06g00053 140 PIRSF AP_complex_sigma 1 120 IPR016635 GO:0015031
Aip06g00053 140 CDD AP2_sigma 1 114 IPR027156 GO:0016192|GO:0030122|GO:0035615|GO:0072583
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00053 Aip-Chr6 490089 492294 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00053 06 490089 492294 Aip06g00053 06 490089 492294 ECH