Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00046 ATGGATCATCGTCAAGTCTCAGTATTCATTTCCATGTTATTAACACTTCATCTCTCATTATCAGGGGTAATTGCAACCACATTCACATTGGTTAACAAATGTGACTACACAGTATGGCCGGGAATTCTATCTAACGCCGGAGTCTCCCCTCTCTCCACCACCGGCTTCGTTCTCCAACCCGGCCAGTCCACTCCAGTCACCGCCGCAGCTGGCTGGGGCGGCCGCTTCTGGGGCCGAACCCTCTGCTCCCAAGACTCCACAGGAAAATTCTCCTGCGTCACTGGCGACTGCGGCTCAGGAAAGCTTGAGTGCTCCGGCAACGGCGCCACGCCACCGGCCACGCTGGCCGAGTTCACACTTGACGGCTCTGGCGGCCTCGATTTTTTCGACGTCAGCCTCGTCGACGGCTACAACGTCCCCATGCTGGTGGCACCCAGCGGCGGATCCGACGCCGGAAACTGCACCGCCACGGGATGCGTCGGAGATTTGAACGGCGCGTGTCCTTCGGAGCTGAGGGTTATGAGTGAGGATGGAAAACAAGGAGTCGCGTGTAAAAGCGCGTGTGAAGCGTTCGGTTCGCCTCAATATTGCTGCAGCGGCGCGTATGGGACGCCGGATACTTGCAAGCCATCGAGTTACTCGCAAATATTCAAAAGCGCTTGCCCACGCGCCTATAGCTACGCGTACGATGACAAGACCAGCACGTTTACTTGCGCCAATGCCGATTACACAATTACCTTTTGCCCTGCCCCTAGTACAAGTCAGAAAGCGTCAAATGAAGGTGGTTCTTCTGCATCATCCTTACTGGACAATGGCACAATGGTGTACCAAGGCTTCGGTCAGAGCGAGATCTCATGGGCCACGTGCACCCATGTGTTCCAATCTCGAGCAATCGCCGCCGTTGTTGGTGTCACCATGGCAGTTTGGCGCTTCTCCCAGCTCATCTAA 948 0.557 MDHRQVSVFISMLLTLHLSLSGVIATTFTLVNKCDYTVWPGILSNAGVSPLSTTGFVLQPGQSTPVTAAAGWGGRFWGRTLCSQDSTGKFSCVTGDCGSGKLECSGNGATPPATLAEFTLDGSGGLDFFDVSLVDGYNVPMLVAPSGGSDAGNCTATGCVGDLNGACPSELRVMSEDGKQGVACKSACEAFGSPQYCCSGAYGTPDTCKPSSYSQIFKSACPRAYSYAYDDKTSTFTCANADYTITFCPAPSTSQKASNEGGSSASSLLDNGTMVYQGFGQSEISWATCTHVFQSRAIAAVVGVTMAVWRFSQLI 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00046 315 PIRSF PR5 1 287 IPR001938 -
Aip06g00046 315 Gene3D Thaumatin 26 249 IPR037176 -
Aip06g00046 315 PANTHER BNAA02G17480D PROTEIN 18 274 - -
Aip06g00046 315 PANTHER OS03G0233200 PROTEIN 18 274 IPR001938 -
Aip06g00046 315 SUPERFAMILY Osmotin, thaumatin-like protein 26 249 IPR037176 -
Aip06g00046 315 ProSiteProfiles Thaumatin family profile. 25 249 IPR001938 -
Aip06g00046 315 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Aip06g00046 315 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Aip06g00046 315 PRINTS Pathogenesis-related protein signature 127 143 IPR001938 -
Aip06g00046 315 PRINTS Pathogenesis-related protein signature 239 248 IPR001938 -
Aip06g00046 315 CDD TLP-PA 27 248 - -
Aip06g00046 315 SMART tha2 28 249 IPR001938 -
Aip06g00046 315 Pfam Thaumatin family 32 249 IPR001938 -
Aip06g00046 315 ProSitePatterns Thaumatin family signature. 88 104 IPR017949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00046 Aip-Chr6 386238 388835 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00046 06 386238 388835 Aip05g00399 05 4464212 4465472 ECH
Aip06g00046 06 386238 388835 Aip06g00046 06 386238 388835 ECH