Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00045 ATGGCTTCCTTATTGTTTTCCTATTACTGTTTCTCTTCACACATTGCAATCATCTTGTTTCTATTTTGCTTCGATAAAGGAGCATTAGGGGCCAAGTTTACAATAATTAACAAGTGTGATTACACGGTGTGGCCTGGGATTCTTGCCAATGCTGGCAGCTCCGCATTGGATACCACCGGCTTCCACCTCCCATCCGGCGGGTCGAGGAGCTTTCAAGCCCCACCCAATTGGTCAGGCAGGTTTTGGGGCCGAACCGGCTGCAATTTTGACCCCAATACCCAACAGGGCACCTGCACCACAGGGGATTGTGGCTCCAACCAACTTGAATGCAATGGTTCCGGGGCAGACCCACCCGTAACACTAGCCGAGTTCACAATCGGGTCGGGTTCCCAATCCCAGGATTATTACGACGTCAGCCTGGTTGATGGATACAATCTACCTATGATGGTGGATGCGGGTGGCGGGTCGGGTGAATGTGGGTCAACGGGTTGCGTAGCTGACCTGAACCGGCAATGCCCGAATGAGTTGAGGGTTAGTAACCGAGTGGCATGCAAGAGCGCGTGTGAAGCGTTTCAGAGGGCTGAATACTGCTGCAGCGGCACCTACGCTTCACCTGCCACATGCAAGCCTTCGGTTTACTCCACAATGTTCAAGAGCGCGTGCCCCAAATCGTATAGCTACGCATACGACGACCCTACGAGTACGTTTACGTGTACGGGAGCTGATTATACCATCACATTCTGCCCTTCAACCACAAGCCAAAAATCAGCAAGAGTGTCACCACCTGAAACAGGAACAGGGGAGATGCCTATGATAGTGAACAGTTCATGGTTCTCTGATATTTTTTATGGACTCTCGCCCAAGTCCTACTCTTCCCCAACCTTACTCATTGCCACTCTCACTATCCTAACTTTCCTCAATTTGCAATCCTCATAG 936 0.5075 MASLLFSYYCFSSHIAIILFLFCFDKGALGAKFTIINKCDYTVWPGILANAGSSALDTTGFHLPSGGSRSFQAPPNWSGRFWGRTGCNFDPNTQQGTCTTGDCGSNQLECNGSGADPPVTLAEFTIGSGSQSQDYYDVSLVDGYNLPMMVDAGGGSGECGSTGCVADLNRQCPNELRVSNRVACKSACEAFQRAEYCCSGTYASPATCKPSVYSTMFKSACPKSYSYAYDDPTSTFTCTGADYTITFCPSTTSQKSARVSPPETGTGEMPMIVNSSWFSDIFYGLSPKSYSSPTLLIATLTILTFLNLQSS 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00045 311 PANTHER OS03G0233200 PROTEIN 15 258 IPR001938 -
Aip06g00045 311 Pfam Thaumatin family 37 249 IPR001938 -
Aip06g00045 311 CDD TLP-PA 32 248 - -
Aip06g00045 311 SUPERFAMILY Osmotin, thaumatin-like protein 32 250 IPR037176 -
Aip06g00045 311 Gene3D Thaumatin 31 249 IPR037176 -
Aip06g00045 311 PRINTS Pathogenesis-related protein signature 134 150 IPR001938 -
Aip06g00045 311 PRINTS Pathogenesis-related protein signature 80 91 IPR001938 -
Aip06g00045 311 PRINTS Pathogenesis-related protein signature 239 248 IPR001938 -
Aip06g00045 311 PRINTS Pathogenesis-related protein signature 32 44 IPR001938 -
Aip06g00045 311 ProSiteProfiles Thaumatin family profile. 30 249 IPR001938 -
Aip06g00045 311 SMART tha2 33 249 IPR001938 -
Aip06g00045 311 PANTHER THAUMATIN-LIKE PROTEIN 1 15 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00045 Aip-Chr6 379097 380588 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00045 06 379097 380588 Aip05g00399 05 4464212 4465472 ECH
Aip06g00045 06 379097 380588 Aip06g00045 06 379097 380588 ECH