Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00018 ATGGGGGTGAAGAGAGGGGTTGCTACCGCCGTGGTGTTGTGTGTGTTGGCTTTTGTGAGCGTGAGTCTTGGTGAAGATCCCTACAGGTTCTTCGACTGGAATGTTACCTACGGCGACATTTACCCGCTCGGTGTTCGTCAACAGGGAATACTTATAAACGGCCAATTCCCAGGACCAGACATTCATTCAGTTACCAACGACAACCTCATCATCAATGTCTTCAACAGCTTGGACCAGCCCTTTCTCCTCTCCTGGAATGGGGTCCAACAGAGAAGGAACTCATACGAGGATGGGGTGTTTGGAACAACATGTCCCATCCCACCGGGGAAGAACTTCACTTACATACTTCAAGTGAAGGATCAGATTGGAAGCTTTTACTACTTCCCTTCTCTTGCATTCCACAAAGCTGCGGGCGGCTTCGGAGGCATCAGGATCCTCAGCAGGCCAAGGATCCCGGTCCCCTTCCCTGATCCCGCCGGCGATTACACTGTTCTCATTGGAGACTGGTACAAGGCCAACCACACGGATTTGCAAAGGCAACTTGATAGCGGAAGAAAGCTAGCACTCCCCGATGGAATCCTGATCAATGGTCGCGGGGACAACGGGGCCTCATTCAACGTGGAACAAGGAAAGACTTACAGGCTGAGAATATCAAATGTGGGGCTGGAGAATTCCCTGAATTTCCGCATACAAAACCACAAGATGACCCTGGTGGAAGTGGAAGGAACCCATACCCTTCAGACCACATACTCCTCTCTCGATGTCCACGTTGGTCAATCCTACTCCGTCCTAGTCACCGCCGATCAACCTCCCCGGGACTACTACATCGTGGTTTCCACTCGCTTCACCACCACAGTCCTCACCACCACCGGAATTCTTCGCTACAGCAACTCAGCAGGGCCAGTGCAGGGCCCGCCACCTGGGGGACCCACCATCCAGATTGACTGGTCGTTGAACCAGGCCCGGTCCATCAGGACGAACCTTACAGCAAGTGGGCCAAGGCCCAACCCGCAAGGGTCGTACCACTACGGTCTCATAAACCTGACGAGAACAATCGTGGTGTCGAGCTCAGCCGGGCAGGTGAATGGGAAGCAGAGATACGCCATTAACAGCGTGTCTTACGTTGCACCCGACACTCCTCTCAAGGTGGCCGACTTCTTCAAGATCCCCGGCGTCTTCCGCGTGGGGAGCATATCCGACAGGCCCAGCGGCTCTGCCATCTACCTTGACACGTCTGTCATGCAGACTGACTACAGAACTTTTGTGGAGATTGTCTTCCAGAACGACGAGGACATCATCCAGTCCTATCATCTTGATGGCTACTCTTTCTTCGTTGTTGGTATGGATGGAGGAACATGGACAGCTGGTAGCAGGAACGAGTACAATCTTCGAGACGCAGTTTCGCGATGCACGACGCAGGTATATCCAAAGTCATGGACAGCAATATATGTGGCGTTGGACAACGTGGGAATGTGGAACTTGAGATCTGAATTCTGGGCAAGGCAATACCTGGGCCAACAATTCTATATGAGAGTGTACACAACATCCACTTCCCTCAGAGATGAATACCCTATTCCCAAGAATGCTCTTCTCTGTGGAAAGGCCTCTGGCCGACACACCCGACCCCTCTAA 1632 0.5263 MGVKRGVATAVVLCVLAFVSVSLGEDPYRFFDWNVTYGDIYPLGVRQQGILINGQFPGPDIHSVTNDNLIINVFNSLDQPFLLSWNGVQQRRNSYEDGVFGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIPVPFPDPAGDYTVLIGDWYKANHTDLQRQLDSGRKLALPDGILINGRGDNGASFNVEQGKTYRLRISNVGLENSLNFRIQNHKMTLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPPRDYYIVVSTRFTTTVLTTTGILRYSNSAGPVQGPPPGGPTIQIDWSLNQARSIRTNLTASGPRPNPQGSYHYGLINLTRTIVVSSSAGQVNGKQRYAINSVSYVAPDTPLKVADFFKIPGVFRVGSISDRPSGSAIYLDTSVMQTDYRTFVEIVFQNDEDIIQSYHLDGYSFFVVGMDGGTWTAGSRNEYNLRDAVSRCTTQVYPKSWTAIYVALDNVGMWNLRSEFWARQYLGQQFYMRVYTTSTSLRDEYPIPKNALLCGKASGRHTRPL 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00018 543 Gene3D - 28 149 IPR008972 -
Aip06g00018 543 Gene3D - 344 540 IPR008972 -
Aip06g00018 543 Pfam Multicopper oxidase 35 148 IPR011707 GO:0005507
Aip06g00018 543 PANTHER OSJNBA0084K11.18 PROTEIN 13 536 - -
Aip06g00018 543 SUPERFAMILY Cupredoxins 24 175 IPR008972 -
Aip06g00018 543 PANTHER MULTI-COPPER OXIDASE 13 536 IPR045087 -
Aip06g00018 543 SUPERFAMILY Cupredoxins 155 335 IPR008972 -
Aip06g00018 543 Pfam Multicopper oxidase 389 515 IPR011706 GO:0005507|GO:0016491
Aip06g00018 543 Gene3D - 159 308 IPR008972 -
Aip06g00018 543 Pfam Multicopper oxidase 161 297 IPR001117 -
Aip06g00018 543 SUPERFAMILY Cupredoxins 345 534 IPR008972 -
Aip06g00018 543 CDD CuRO_3_AAO_like_1 377 497 IPR034275 GO:0005507
Aip06g00018 543 CDD CuRO_1_AAO_like_1 30 145 IPR034273 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00018 Aip-Chr6 167998 171469 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00018 06 167998 171469 Aip06g00018 06 167998 171469 ECH
Aip06g00018 06 167998 171469 Aip07g02357 07 98066002 98071160 PCT