Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aip06g00005 | ATGGAGAAATTGACAGGAGCAGGACGCGTAGGAGCGGCAACAGTAGTGTTGTCGGCGAAGGAGGCGTTCGAGAAACTGGAGAAGGTTGGAGAAGGGACGTACGGGAAGGTGTACAGAGCGAGGGACAAGGCCACCGGCAAGATCGTCGCCCTCAAGAAGACTCGTCTCCACGAGGACGAAGAGGGCGTCCCTCCCACCACTCTCCGCGAGGTCTCCATCCTACGCATGCTCTCCCGCGATCCCCATGTAGTCAGGTTAATGGATGTCAAACAAGGTCAGAACAAGGAAGGCAAGACCGTGCTCTACCTGGTATTCGAGTACATGGACACCGATCTCAAGAAATTCATTCGCTCTTTCCGTCAGAGTAGTCAATTCATCCCACCCAAAACCGTCAAAAGCTTGATGTACCAACTCTGTAAGGGCGTTGCTTTCTGCCACGGACATGGAATCTTGCACAGGGACTTGAAGCCTCACAATCTCTTGATGGACCGATCAACAATGATGCTCAAAATAGCTGATCTTGGACTCGCTCGAGCTTTTACTGTGCCAATTAAGAAATACACCCACGAGATACTAACCTTGTGGTATAGAGCTCCCGAAGTCCTTCTTGGTGCTACCCATTACTCAATGGCGGTGGATATGTGGTCCGTTGGCTGCATATTTGCTGAACTTGTCGCTAAGCAAGCCCTTTTCCCTGGTGATTCGGAACTGCAACAACTCCTCCACATATTCAGGCTATTGGGTACCCCTAATGAAGAGGTGTGGCCAGGCGTTAGTAAACTAATGAACTGGCATGAGTACCCTCAGTGGAACCCTCAAGAGCTGTACATGGCTGTTCCAACCTTGGATGATCAAGGAGTCGATCTACTATCTCAAATGCTGCAATACGAGCCTTCCAAGCGGATTTCTGCAAAGAAAGCTATGGAACACCCTTACTTCCATGACCTGGATAAGACCAATCTCTAG | 966 | 0.501 | MEKLTGAGRVGAATVVLSAKEAFEKLEKVGEGTYGKVYRARDKATGKIVALKKTRLHEDEEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGKTVLYLVFEYMDTDLKKFIRSFRQSSQFIPPKTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRSTMMLKIADLGLARAFTVPIKKYTHEILTLWYRAPEVLLGATHYSMAVDMWSVGCIFAELVAKQALFPGDSELQQLLHIFRLLGTPNEEVWPGVSKLMNWHEYPQWNPQELYMAVPTLDDQGVDLLSQMLQYEPSKRISAKKAMEHPYFHDLDKTNL | 321 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aip06g00005 | 321 | Gene3D | Phosphorylase Kinase; domain 1 | 18 | 109 | - | - | |
| Aip06g00005 | 321 | PANTHER | CELL DIVISION PROTEIN KINASE | 16 | 319 | - | - | |
| Aip06g00005 | 321 | Pfam | Protein kinase domain | 23 | 313 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Aip06g00005 | 321 | PANTHER | - | 16 | 319 | - | - | |
| Aip06g00005 | 321 | ProSiteProfiles | Protein kinase domain profile. | 23 | 313 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Aip06g00005 | 321 | SMART | serkin_6 | 23 | 313 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Aip06g00005 | 321 | SUPERFAMILY | Protein kinase-like (PK-like) | 19 | 316 | IPR011009 | - | |
| Aip06g00005 | 321 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 150 | 162 | IPR008271 | GO:0004672|GO:0006468 | |
| Aip06g00005 | 321 | ProSitePatterns | Protein kinases ATP-binding region signature. | 29 | 52 | IPR017441 | GO:0005524 | |
| Aip06g00005 | 321 | Gene3D | Transferase(Phosphotransferase) domain 1 | 111 | 320 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aip06g00005 | Aip-Chr6 | 44875 | 46486 | Transposed |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| PK | CMGC_CDK-Pl | Aip06g00005 | Pkinase | 6.5e-72 | CL0016 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Aip06g00005 | 06 | 44875 | 46486 | Aip06g00005 | 06 | 44875 | 46486 | ECH |