Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00004 ATGAGTGGCGGGACTATGGTTTTGGTTCATCCACAAGCCAGTACTTTCTTCGTCTTGTCTTCGTTTTCTTCCTCCTCTTTTGTTAGCGGCTCACTCCAGTTTCGTCGTTCTCTCTCTGCAAGTTTAACCCCACCTAGAATCAGCGCCAGGGAACATCCTTGTTTCTTCTGCAATTCTTCGTGGAAAGAGCTCGCTGGAGTGTTACTGTTCTCGGCGTTTCCTTTCGCCGCCGTGAAAGCTATAGCTAATAGTCCTCTAGGGGAATCACTTCAGAGGAAACTGGAGAAGAGAAAGAAATTCGCTGTTGAAAACTCTTCTAAATTCATGGCCTTGGCCCAGGAGGCCCGAAAGCGGAGCTTTTGGTATGGAGAAGATCGGCCTGGTTGGCTTGGTCCTATTTCATATGAATATCCATCATATCTTACTGGGGAACTTCCTGGAGATTATGGCTTTGACATTGCCGGGCTCGGCAAGGATCCTGACACACTGCAGAAATACTTCAACTTTGAGATATTGCATGCTCGGTGGGCAATGCTTGCATCTATTGGTGCTCTTATTCCTGAAATATTGGACCTATTGGGAGCTGTTCACTTTGTCGAACCTGTGTGGTGGCGTGTTGGTTATTCAAAGCTCAAGGGAGATACTCTAGATTACCTGGGCATCCAAGGTCTTCACTTAGCTGGTAGCCAAGGAGTGCTTGTGATTGCTATTTGCCAAGCCCTCCTTATGGTTGGACCAGAATATGCTAGATACTGTGGGACTGAGGCATTGGAGCCTCTAGGAATATTTCTGCCTGGTGATATAAATTATCCTGGTGGAGCATTGTTTGATCCCTTAAATTTGTCCAAAGATCCTGAAGCTTTTGAGGAGTTGAAGGTGAAAGAAATTAAAAATGGACGCCTAGCAATGGTTGCCTGGTTAGGCTTTTACGTGCAAGCAGCTCTGACGGGTAAAGGTCCTGTGCAGAACTTTCTTGACCACATCTCTGATCCTGTCCATAATAACTTGATTGCTTCACTAAGCTTAGTGAAAATACTCAATTAA 1044 0.455 MSGGTMVLVHPQASTFFVLSSFSSSSFVSGSLQFRRSLSASLTPPRISAREHPCFFCNSSWKELAGVLLFSAFPFAAVKAIANSPLGESLQRKLEKRKKFAVENSSKFMALAQEARKRSFWYGEDRPGWLGPISYEYPSYLTGELPGDYGFDIAGLGKDPDTLQKYFNFEILHARWAMLASIGALIPEILDLLGAVHFVEPVWWRVGYSKLKGDTLDYLGIQGLHLAGSQGVLVIAICQALLMVGPEYARYCGTEALEPLGIFLPGDINYPGGALFDPLNLSKDPEAFEELKVKEIKNGRLAMVAWLGFYVQAALTGKGPVQNFLDHISDPVHNNLIASLSLVKILN 347
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00004 347 SUPERFAMILY Chlorophyll a-b binding protein 120 339 - -
Aip06g00004 347 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 58 336 IPR001344 GO:0009765|GO:0016020
Aip06g00004 347 Pfam Chlorophyll A-B binding protein 138 313 IPR022796 -
Aip06g00004 347 Gene3D Chlorophyll a/b binding protein domain 128 339 - -
Aip06g00004 347 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 7, CHLOROPLASTIC 58 336 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aip06g00004 Aip-Chr6 33491 36599 Transposed
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00004 06 33491 36599 Aip06g00004 06 33491 36599 ECH