Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03128 AAGCTGATAGCGGCTCAATTGAGAGTGTCAATCTGGCTCGAGCCGATGACGGGGAGCTTGAGCTGGAGCTGACTTTGGGGTCTATTTTTAAATCTTTGCTATACAAAGCTTGCGGCCGGATAGTGAACCCGGTTTTCGGTTCGACCGGGTTGCTATCGACTGAAAGCTGGCACTTGTGCGAAGCAGCTGTTGAAGCCGTTCTTAGCGGCACGCCGATTAGGCAACAGGATGCTTCAGATGGCGGTGACCAGCTGCTAAACCCGTCTGATATTCGCCACGTGGTGAAGAGGGGGAAATCTTGCAGCTCCGATCATGTCCTTAAGCCCCGGAAGAGCCAGTTCAAGAGGCGCGCTGAGAAGTCGAAGCCGGAGCCGGAGGTTAAGCTGGATCAGGGTGTAGCTGAGTTGGTGGTGGAGGCTTGCGTAGTGAATGAGTTAGATGACTCGGCGAGCCCTGACTCAGGGTCTGGTCTGAGTGAGCACGTAAGTGTTGTTGTTGGTGGCGGCGCAGAAGCTGATAGCGGCTCAATTGAGAGTGTCAATCTGGCTCGAGCCGATGACGGGGAGCTTGAGCTGGAGCTGACTTTGGGGTGTCAGTGGCTTTGA 605 0.5488 ADSGSIESVNLARADDGELELELTLGSIFKSLLYKACGRIVNPVFGSTGLLSTESWHLCEAAVEAVLSGTPIRQQDASDGGDQLLNPSDIRHVVKRGKSCSSDHVLKPRKSQFKRRAEKSKPEPEVKLDQGVAELVVEACVVNELDDSASPDSGSGLSEHVSVVVGGGAEADSGSIESVNLARADDGELELELTLGCQWL 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03128 200 PANTHER LOB DOMAIN-CONTAINING PROTEIN 41-LIKE 27 198 - -
Aip05g03128 200 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 27 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03128 Aip-Chr5 134809301 134813934 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03128 27 96 AS2 family AT1G67100 56.000 1.79e-19 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aip05g03128 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03637 09 143179521 143180879 Aip05g03128 05 134809301 134813934 ECH
Aip05g03128 05 134809301 134813934 Aip05g03128 05 134809301 134813934 ECH