Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03029 ATGGCTCCCACCACTGTCATGGCTGCCACTGCCACATCAATTCAAACAAACAACCCCGACTCGGTTGAATCCTCGCCGCGCTGTCGTATCGGTGAAACATGGAATGATGAGCTTATTGTGCCGGTCCCAGGCGCCAAGCTCCGCCTCATGTGCAGCTACGGTGGCCACATCATGCCACGCCCCCATGATAAGTCCCTCAGTTACATAGGTGGTGACACTAGAATCGTGGTGGTGGATCGCAATTCAACCCTAAAGGACCTCTGTTTGCGCCTTTCCCGCACTTTACTCAATGGAAGACCCTTCACACTCAAGTACCAGTTACCAAACGAGGACCTTGACAACCTCATCTCTGTCACCACTGATGAAGACCTTGACAACATGATCGAAGAGTATGATCGTGTGGCTGCAGCATCAGCATCTACCCTGAAGCCTTCACCTTCAAGACTCAGGGTGTTCCTGTTCTTCTCCAAGCCAGAGACCACTGTTTCAATGGGATCCCTCCTTGATGATGCGAAATCTGAGACATGGTTCGTGGATGCGCTCAACAACTCGGGGATGCTCACAAGGGGTGTGTCAGATTCCGCAGCAGGAGAAACCATTGTAAACCTTGATGGTGTTGGCCCTGCTGTTTCAGCTAGTGGTTCAAGCAACAACTTGGAGGCTCAGGCTGCGGCAGTGGCAGAGTCTTTGGTTCTGGCTGATAATATCACTGGCAACAATAACAACAACAACAACAACAAGGTGAAGAATTTGCAGGATGTTGCAGCTATGACAATTGGCGCAAGTGGTGTGAGGCGAGATGAAGGGTTTGTTGTTGTTCCCTCTACTGTGGCTATGCCTGCTGCAGTGCCTGCAACTATGAGTTTGGCTGCAGCAGCAATGGTTACTAGCAATAGTAGTGATATCATGAATAGGCTTATTATCTCTGAGGATGAGAGATCAGATCCTGGTGTTCCTCTTGGGTTTGGGAAGCCTCCTTTACCATTGCAACTTGTGCAACCAAGGACTGGTGGTGGTGTGAGTTTACCTTCTCCAGATTCAGTTGCAAGTGACAGTAGTAGCATTGCATCAACAAATTCTTTCTCGAAGAATGTGTACTATCAAGAACAAGTCCAACCTTCACATGTAGATAACAAAGCTCCTACTATAAGCAATGCCAAGATTGAAATTAGAGAACAAATTCAGGATCCAAATTACACGTTACCTCCACAATTGGATCAAAACCAGCAACTCCACCAGCAATTTGTGCAAGCAAGCAGCCCCTACATTCACCACCCTGCAGCCGCCACCAATACAGTGCCAGTGTCATCTTACTACCCAGTTTACGCACCGCCGCCACCGCTGCCATCACAGCCAACACTTCACCAACATCCAATTCCCCAAACTCAACAACAGCAACAGTATCAACCAGTTTATGTTATGCCTGTTGGACACACACAACAACCATACAATGTAACATTGCAACACAACATTGCTGATCCTAACATGGTAGCATCAGGTAGACAACTAGTACCCCAGAGTATTGCTGCTCCTGCAGTGTCAACAACAGCATACAAAGATGGCACATTACCAATTTACCCTCCTAGGCCAAATACCCAACCACAAACTACTCAGGCATTTATTCAAATACCTTCTAGTCACTTTCAGCAACAACCACAGTATGTGGGTTTGACCCAAGTTCAGCACCATCAACAACCACCACCACCACAGCACATTGCTGTGGTTCCATCTGGTAGTGGTGGAGGTGGTGGTGCTAATTACGGCTATGAATATGGTGGTGGCACTGTGCAAGATCAAGCTGCATACTACACACAACAGCAACAAGCTACTACAGCTCCATTGACTTCTCAGTACCAATCCATGACTCCGGCGGCGGCAGCGGCGGCGCTATCGGATGCTTCGAAGCCATTCCCCAATGAAAATCTTCAGCAGCCAAACAGAGCTTCACAACCCGTATAG 1959 0.4824 MAPTTVMAATATSIQTNNPDSVESSPRCRIGETWNDELIVPVPGAKLRLMCSYGGHIMPRPHDKSLSYIGGDTRIVVVDRNSTLKDLCLRLSRTLLNGRPFTLKYQLPNEDLDNLISVTTDEDLDNMIEEYDRVAAASASTLKPSPSRLRVFLFFSKPETTVSMGSLLDDAKSETWFVDALNNSGMLTRGVSDSAAGETIVNLDGVGPAVSASGSSNNLEAQAAAVAESLVLADNITGNNNNNNNNKVKNLQDVAAMTIGASGVRRDEGFVVVPSTVAMPAAVPATMSLAAAAMVTSNSSDIMNRLIISEDERSDPGVPLGFGKPPLPLQLVQPRTGGGVSLPSPDSVASDSSSIASTNSFSKNVYYQEQVQPSHVDNKAPTISNAKIEIREQIQDPNYTLPPQLDQNQQLHQQFVQASSPYIHHPAAATNTVPVSSYYPVYAPPPPLPSQPTLHQHPIPQTQQQQQYQPVYVMPVGHTQQPYNVTLQHNIADPNMVASGRQLVPQSIAAPAVSTTAYKDGTLPIYPPRPNTQPQTTQAFIQIPSSHFQQQPQYVGLTQVQHHQQPPPPQHIAVVPSGSGGGGGANYGYEYGGGTVQDQAAYYTQQQQATTAPLTSQYQSMTPAAAAAALSDASKPFPNENLQQPNRASQPV 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03029 652 MobiDBLite consensus disorder prediction 1 24 - -
Aip05g03029 652 MobiDBLite consensus disorder prediction 621 652 - -
Aip05g03029 652 SUPERFAMILY CAD & PB1 domains 62 165 - -
Aip05g03029 652 MobiDBLite consensus disorder prediction 1 26 - -
Aip05g03029 652 Gene3D - 67 154 - -
Aip05g03029 652 MobiDBLite consensus disorder prediction 636 652 - -
Aip05g03029 652 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 5 645 - -
Aip05g03029 652 PANTHER OS05G0427100 PROTEIN-RELATED 5 645 - -
Aip05g03029 652 SMART PB1_new 61 154 IPR000270 GO:0005515
Aip05g03029 652 MobiDBLite consensus disorder prediction 334 355 - -
Aip05g03029 652 CDD PB1_UP2 50 154 - -
Aip05g03029 652 Pfam PB1 domain 62 154 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03029 Aip-Chr5 132814036 132816559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03029 46 183 MAP Kinase Kinase Kinase AT5G57610 44.286 4.69e-27 115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g03690 09 143745662 143748435 Aip05g03029 05 132814036 132816559 ECH
Aip05g03029 05 132814036 132816559 Aip05g03029 05 132814036 132816559 ECH