Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02945 ATGGGGGAAACAAATGCACGGTCAAATTCGCATAAGCATTGGCGTTTTGGTACGAATTCGCAGCAGAATATTCAGTTGCGTTCACGGTCGAGTTCGAATTCGAGATCTTCGTCACCGGAATCACCACCAAAGTCTCTGATGGAGAACCTTATGGGACTTCTTAGGGTTCGAATCAAGCGTGGCGTCAACCTCGCCGTTCGTGATGTTCGTAGTAGCGATCCCTATGTTGTCATCAAGATGGGTAAACAGAAACTTAAGACTCGTGTGATTAAAAGGGATGTTAATCCTGAGTGGAATGAGGACCTCACGCTTTCTGTTGTAGATCCGCATGCTTCAGTCTCACTGACTATATATGACCACGATACTTTTAGCAAAGATGACAAAATGGGAGATGCAGAGTTTGAAATCTTACCATTTATAGAAGCCTTGAAGATGAATGTGACAGGCCTGCCAAATGGTACTGTGGTCAAAAGAATACAACAAAGCCGGGATAACTATCTCGCAGATGAGAGCCGCATCACTTATATCAACGGTAAGCTTGTTCAAGATATGATCCTTAGACTGCGAAACGTGGAATGTGGTGAACTGGAAATCCAGCTAAATTGGATTGATCTTCCTGGGTCCAAGGGTTTATGA 636 0.4403 MGETNARSNSHKHWRFGTNSQQNIQLRSRSSSNSRSSSPESPPKSLMENLMGLLRVRIKRGVNLAVRDVRSSDPYVVIKMGKQKLKTRVIKRDVNPEWNEDLTLSVVDPHASVSLTIYDHDTFSKDDKMGDAEFEILPFIEALKMNVTGLPNGTVVKRIQQSRDNYLADESRITYINGKLVQDMILRLRNVECGELEIQLNWIDLPGSKGL 211
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02945 211 SMART C2_3c 53 148 IPR000008 -
Aip05g02945 211 MobiDBLite consensus disorder prediction 1 46 - -
Aip05g02945 211 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 48 143 IPR035892 -
Aip05g02945 211 PANTHER CALCIUM-DEPENDENT ARF-TYPE GTPASE ACTIVATING FAMILY PROTEIN 42 210 - -
Aip05g02945 211 Pfam C2 domain 52 136 IPR000008 -
Aip05g02945 211 Gene3D C2 domain 47 209 IPR035892 -
Aip05g02945 211 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 42 210 IPR044562 -
Aip05g02945 211 ProSiteProfiles C2 domain profile. 38 152 IPR000008 -
Aip05g02945 211 CDD C2_ArfGAP 52 194 - -
Aip05g02945 211 MobiDBLite consensus disorder prediction 11 44 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aip05g02945 Aip-Chr5 131288965 131291483 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02945 84 211 C2H2 Transcription Factor Family AT1G70790 56.923 1.83e-49 156
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03948 03 122520387 122528860 Aip05g02945 05 131288965 131291483 ECH
Aip05g02945 05 131288965 131291483 Aip05g02945 05 131288965 131291483 ECH
Aip03g04439 03 128721376 128722346 Aip05g02945 05 131288965 131291483 PCT