Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip05g02945 | ATGGGGGAAACAAATGCACGGTCAAATTCGCATAAGCATTGGCGTTTTGGTACGAATTCGCAGCAGAATATTCAGTTGCGTTCACGGTCGAGTTCGAATTCGAGATCTTCGTCACCGGAATCACCACCAAAGTCTCTGATGGAGAACCTTATGGGACTTCTTAGGGTTCGAATCAAGCGTGGCGTCAACCTCGCCGTTCGTGATGTTCGTAGTAGCGATCCCTATGTTGTCATCAAGATGGGTAAACAGAAACTTAAGACTCGTGTGATTAAAAGGGATGTTAATCCTGAGTGGAATGAGGACCTCACGCTTTCTGTTGTAGATCCGCATGCTTCAGTCTCACTGACTATATATGACCACGATACTTTTAGCAAAGATGACAAAATGGGAGATGCAGAGTTTGAAATCTTACCATTTATAGAAGCCTTGAAGATGAATGTGACAGGCCTGCCAAATGGTACTGTGGTCAAAAGAATACAACAAAGCCGGGATAACTATCTCGCAGATGAGAGCCGCATCACTTATATCAACGGTAAGCTTGTTCAAGATATGATCCTTAGACTGCGAAACGTGGAATGTGGTGAACTGGAAATCCAGCTAAATTGGATTGATCTTCCTGGGTCCAAGGGTTTATGA | 636 | 0.4403 | MGETNARSNSHKHWRFGTNSQQNIQLRSRSSSNSRSSSPESPPKSLMENLMGLLRVRIKRGVNLAVRDVRSSDPYVVIKMGKQKLKTRVIKRDVNPEWNEDLTLSVVDPHASVSLTIYDHDTFSKDDKMGDAEFEILPFIEALKMNVTGLPNGTVVKRIQQSRDNYLADESRITYINGKLVQDMILRLRNVECGELEIQLNWIDLPGSKGL | 211 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip05g02945 | 211 | SMART | C2_3c | 53 | 148 | IPR000008 | - | |
Aip05g02945 | 211 | MobiDBLite | consensus disorder prediction | 1 | 46 | - | - | |
Aip05g02945 | 211 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 48 | 143 | IPR035892 | - | |
Aip05g02945 | 211 | PANTHER | CALCIUM-DEPENDENT ARF-TYPE GTPASE ACTIVATING FAMILY PROTEIN | 42 | 210 | - | - | |
Aip05g02945 | 211 | Pfam | C2 domain | 52 | 136 | IPR000008 | - | |
Aip05g02945 | 211 | Gene3D | C2 domain | 47 | 209 | IPR035892 | - | |
Aip05g02945 | 211 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 42 | 210 | IPR044562 | - | |
Aip05g02945 | 211 | ProSiteProfiles | C2 domain profile. | 38 | 152 | IPR000008 | - | |
Aip05g02945 | 211 | CDD | C2_ArfGAP | 52 | 194 | - | - | |
Aip05g02945 | 211 | MobiDBLite | consensus disorder prediction | 11 | 44 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip05g02945 | Aip-Chr5 | 131288965 | 131291483 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip05g02945 | 84 | 211 | C2H2 Transcription Factor Family | AT1G70790 | 56.923 | 1.83e-49 | 156 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aip03g03948 | 03 | 122520387 | 122528860 | Aip05g02945 | 05 | 131288965 | 131291483 | ECH | |
Aip05g02945 | 05 | 131288965 | 131291483 | Aip05g02945 | 05 | 131288965 | 131291483 | ECH | |
Aip03g04439 | 03 | 128721376 | 128722346 | Aip05g02945 | 05 | 131288965 | 131291483 | PCT |