Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00901 ATGGACCGGCGGGGCTGGCTCTGGAAGAAAAAATCATCTGACAAATCCAAAATTGCTGAGAAGCCAGGTTCTGAAGCAGAACCTGTTAGTTTTACATTGTCTTCTGTGGCAAATCTTGAAGATGAGGACAGTGGCAAGAATAAGAACTATGTTCAAATATCAATGGAGTCATACACACATATGTGTGCATTGGAGGATCAAGTAAAGGCTTTGGAAGACAAGCTAACAACAGCTTATTCAGAATTAAATAGCAAAGATAATTTAGTTAAACAGCATGCAACAGTTGCCGAGGAAGCGGTCTCAGGGTGGGAAAAAGCTGATGCTGAAGTAGCTTCATTAAGATGTCAACTTGAATCTGTCACTATCTCAAAGCTTGCTGTTGAGGATAGAGCATCTCACTTGGATGGTGCTCTAAAAGAATGCATGAAGCAGATAAGAACTGTTAAGGAAGATAGTGAGCAGAAACTGCAAGACTTGATCCTTATGAAATCCCAGCAGTGGGAAAAAGTTAAGTCAGAGTTTGAAGTGAAAATAGATAAATTGGAGCAAGGACTTCGTTGTGAGGCTAGTGAAAATGCTGCTCTTCTTAGATCCCTGCAAGACAGTTCGAATAAAATAGCGAGACTGAAAGAAGAAAAATCTGAAGCTGAGGCTGAAGTAGAGTTTCTAAAGAAGAATGTTCAGTCATGTGAAAAGGAAATAGCTTCACTGAAGTATGAGTTACATGTGATTTCCAAGGAGCTGGATATCCGAAACGAAGAGAAGAATATGATTATGAGATCAGCAGAAGTGGCAAGCAGAAAACATGCAGAGGATGTTAGGAACATTGCCAAGATAGAAACTGAATGCCAAAGACTCCGTGGTCTGCTGCGAAGGAAGTTACCTGGACTGGCCGCATTGGCTCAAATGAAGCTAGAAGTGGGGATTCCGCAACAAGTTATCAGCACACCCTACCATAGGAAAACTTGTTTAAAAGCTGATGGCATGCAAGAATCTGAGTTTCTTGCCAAAAAGTTGGAGGCATTGGAAGAAGAAACAAAGACATTGAAAGAAGCTTTGGCCACAAGTAATGCTGAATTGCAGGCTTCAAGAAACTTGTATGCCAAAACAGTTGGCAGACTAAAGACCTTAGAAGCAGAGATACAGTTTTTTCACTTAGAAAACGTTGCTGAAAAATCAAATTTGGCAATCAATTTTGGAAACTCATCAAATAGAATTTCCAACAAAATACCAAGCCTCGCTTCTATCTCTGATGACGGCCATGAGGAGCCAGAAAGTCCTGTTGAGTCAAGTGCAGCCTCAACTTGTGACCTTTCTGAAATCAAGAGAGTTACAAGTGTTGGTAAATTTGAGAAAGAAAAGAGTGAAACTATCATAGAACTGATGAATGACTTTCTGGAAGTGGAGAAAATGGCATGTTTATCGGACAATAGCAATGTAGCTCTTGGCATTACTAGCAAAGTTAGTGACTCTGATGGAACAGATAAACAATCAGATAAAGCTTCTAAAGTTGAAGAGACTGATTATATTCCAGAGAAAAATGACAAGGCATCCAAACATGCTGAACACATGCAAGATCTGAAGGAAACAAAGCTGATGTTCCAGGAAAAGGAGCAGCTTCTTGCTGAACTGAAAGAACAATTGGCTTCATCTCATAAATCATACAACTTGGCTGAGATTCAGCTGAAGTGTATGACAGAATCCTATAAGTCACTTCAAATGCATGCAGAATATTTAGAAGCTCAAAATAAGATTCTGCAAGAAAATATAGAGGAGCTAAAGAATGACCTTGTGGAGCAAAAGAAATGTCATGATGATGCCTTGGTGAGGCACAGAGCCATTGAAGAGAAAATGCAAAGGGACAAGTGCTTAGTTTGTGGATCCAATTTGGGAGCAGATAATGGCATGACTACTGGGAAGGATATGGAGCTAGCAGCAGCAGAGAAAAAGCTGGCAGAATGTCAAGAGACTTTGTATACTCTTGGTAGGCACCTGCAAGCTCTGTGTCCTCATATTGAGATACCTATATCTCATCTCGGTAAAAGGCTTCAAACGAATGACATGTTGGTTAAACCAAGTCATGGCTGGTCGAATTCTAATGTGTCCAGTAACTCGAATGAAATTGAACAGGCTGAGGCATCTAGATGTAGTGTTCCTTCCGAGATTCAAGAAGTGAATGTCGAGTTTTCATCGCCTAACTGTCGATCCACACCGTGTCTTTCAGACACTGAAGGCTGCTTTTCTGTGAACTCTTCAATAGGGTCAAGCAAGCCCGGTTATATGCTTACCGAATCGAATTCCTCTTGTTCTGCCTCTGCTACAGGGAAGCATGCACATGGATTCAGACATTTCTCTTCTTTAAAAGGGAAGAATGCTCACTAG 2382 0.4076 MDRRGWLWKKKSSDKSKIAEKPGSEAEPVSFTLSSVANLEDEDSGKNKNYVQISMESYTHMCALEDQVKALEDKLTTAYSELNSKDNLVKQHATVAEEAVSGWEKADAEVASLRCQLESVTISKLAVEDRASHLDGALKECMKQIRTVKEDSEQKLQDLILMKSQQWEKVKSEFEVKIDKLEQGLRCEASENAALLRSLQDSSNKIARLKEEKSEAEAEVEFLKKNVQSCEKEIASLKYELHVISKELDIRNEEKNMIMRSAEVASRKHAEDVRNIAKIETECQRLRGLLRRKLPGLAALAQMKLEVGIPQQVISTPYHRKTCLKADGMQESEFLAKKLEALEEETKTLKEALATSNAELQASRNLYAKTVGRLKTLEAEIQFFHLENVAEKSNLAINFGNSSNRISNKIPSLASISDDGHEEPESPVESSAASTCDLSEIKRVTSVGKFEKEKSETIIELMNDFLEVEKMACLSDNSNVALGITSKVSDSDGTDKQSDKASKVEETDYIPEKNDKASKHAEHMQDLKETKLMFQEKEQLLAELKEQLASSHKSYNLAEIQLKCMTESYKSLQMHAEYLEAQNKILQENIEELKNDLVEQKKCHDDALVRHRAIEEKMQRDKCLVCGSNLGADNGMTTGKDMELAAAEKKLAECQETLYTLGRHLQALCPHIEIPISHLGKRLQTNDMLVKPSHGWSNSNVSSNSNEIEQAEASRCSVPSEIQEVNVEFSSPNCRSTPCLSDTEGCFSVNSSIGSSKPGYMLTESNSSCSASATGKHAHGFRHFSSLKGKNAH 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00901 793 Coils Coil 325 359 - -
Aip05g00901 793 PANTHER FILAMENT-PLANT-LIKE PROTEIN 1 751 - -
Aip05g00901 793 MobiDBLite consensus disorder prediction 1 25 - -
Aip05g00901 793 Coils Coil 527 561 - -
Aip05g00901 793 Coils Coil 192 240 - -
Aip05g00901 793 MobiDBLite consensus disorder prediction 486 508 - -
Aip05g00901 793 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 751 - -
Aip05g00901 793 MobiDBLite consensus disorder prediction 492 508 - -
Aip05g00901 793 MobiDBLite consensus disorder prediction 1 22 - -
Aip05g00901 793 Coils Coil 569 603 - -
Aip05g00901 793 MobiDBLite consensus disorder prediction 694 715 - -
Aip05g00901 793 Pfam Filament-like plant protein, long coiled-coil 85 518 IPR008587 -
Aip05g00901 793 Pfam Filament-like plant protein, long coiled-coil 488 671 IPR008587 -
Aip05g00901 793 MobiDBLite consensus disorder prediction 413 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00901 Aip-Chr5 12455219 12459045 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00901 05 12455219 12459045 Aip05g00901 05 12455219 12459045 ECH
Aip05g00901 05 12455219 12459045 Aip07g02442 07 102693632 102696715 ECH