Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00842 ATGATGAAGCATTTAGTGTTAGTTATTCTTTTGGCCGTTTTGGTTCATGACCATGTTCATGATGGCACTACTACTGTGGAAGCTGCAGGGGATGGTTTTGTAAGAACAAGAGGCATCCACTTTGTGCTGAATGGGAAGCCTTTTTATGCAAATGGCTTCAATGCTTATTGGCTTATGTATGCAGCTTCAGATCCATCTCAGAGGTACAAGGTCTCTTCAGCATTCCATGAAGCAACAAGCCATGGCCTCACAGTTGCTAGAACTTGGGCTTTCAGCGATGGTGGTTATAGACCCTTACAATATGCTCCCGGATTCTACAATGAACAAATGTTTAAGGGGTTAGATTTTGTTATATATGAGGCTAGGAAGTATGGTATGAAGCTGATACTGAGTTTGGTGAACAACTATGAGAGCTTTGGAGGGAAGAAGCAGTATGTGAACTGGGCCAGAAGTAAAGGGCTGTACCTTACATCAGACGATGATTTCTTCAGGAGCCCTCTTGTTAAGGGTTACTATGCAAACCATGTCAAGACTGTTCTTAACAGATACAACAGTTTTACCGGTATTCATTACAAGGATGATCCAACAATCATGGCCTGGGAACTCATGAATGAACCCAGGTGCACTTCAGATCCTTCAGGCAGGACTATTCAGGCTTGGATCACGGAAATGGCTTCCTTAGTGAAGTCCATAGACAGGAACCACTTATTGGAGGCTGGTCTTGAAGGCTTCTATGGTCAATCAACACCCCAAAGGAAGAGAATGAACCCTGCTGGCTTCAATATTGGCACAGATTTCATTGCAAATAACCGCATCCCTGGCATTGACTTTGCAACCGTTCACTGTTACCCCGACCAATGGGTATCCAATTCGAATGAGCAGTATCAACTCTCATTCTTGAACAACTGGCTCAATGCTCACTTCATAGACGCGCAGTATGCTCTGAGGAAGCCAATACTTGTGGCAGAATTTGGAAAATCGTTCAAGGACTCAGGTTACAACACCTACCAAAGGGACCAGCTTTTCAGTACCGTGTTCTACAAGATATTGGCTTCCGCCAAGAGAGGAGGACCGGCAGCAGGAGCACTCTTCTGGCAGCTTCTCACGGAAGGAATGGAGTCATTCCAAGATGGTTATGGCATAATGCTGGGGCAGCGTTCTTCTACTGCAAACATGATTGCTCGGCAGAATCACAGGCTGTACCTTATTCGCAGGATTCTTGGGAGGCTTGCGAATATGCGGCGGTGGAAGAGGGCCAGGGGAAACAGAAGGTCTGGTGGAAATGGGGGTGGAAGTTCAAGAATGGAATTGCCTCAGTTATTGAATTAG 1329 0.4552 MMKHLVLVILLAVLVHDHVHDGTTTVEAAGDGFVRTRGIHFVLNGKPFYANGFNAYWLMYAASDPSQRYKVSSAFHEATSHGLTVARTWAFSDGGYRPLQYAPGFYNEQMFKGLDFVIYEARKYGMKLILSLVNNYESFGGKKQYVNWARSKGLYLTSDDDFFRSPLVKGYYANHVKTVLNRYNSFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASLVKSIDRNHLLEAGLEGFYGQSTPQRKRMNPAGFNIGTDFIANNRIPGIDFATVHCYPDQWVSNSNEQYQLSFLNNWLNAHFIDAQYALRKPILVAEFGKSFKDSGYNTYQRDQLFSTVFYKILASAKRGGPAAGALFWQLLTEGMESFQDGYGIMLGQRSSTANMIARQNHRLYLIRRILGRLANMRRWKRARGNRRSGGNGGGSSRMELPQLLN 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00842 442 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE-LIKE PROTEIN 2 424 - -
Aip05g00842 442 MobiDBLite consensus disorder prediction 418 442 - -
Aip05g00842 442 PANTHER - 2 424 IPR045053 GO:0004553
Aip05g00842 442 Pfam Cellulase (glycosyl hydrolase family 5) 45 341 IPR001547 GO:0004553|GO:0071704
Aip05g00842 442 Gene3D Glycosidases 29 404 - -
Aip05g00842 442 SUPERFAMILY (Trans)glycosidases 33 391 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00842 Aip-Chr5 11299638 11301754 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00842 05 11299638 11301754 Aip05g00842 05 11299638 11301754 ECH
Aip05g00842 05 11299638 11301754 Aip07g02552 07 106136667 106138604 ECH