Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00605 ATGCACTGGGGAACAGCTCAAAGATGTGATGGCTTGCCAACTGAAGATGATGAAGGAATGCTTGAAGAACCACCATTGCGGGGGTTGTGTTGCAGCGGGACGGGAATGGAGGCTCGAAGCTACTCAGACGGGTTGAAGAGGGATTTTCGGGAGACACAGAAACAGAAAGAGAAAGAAAAGAGTAGTGCCATGAAACAAACAACAAACAATGCAACAAACACAAACACCTTATCTGCTTTGAACATGAACATGCCTCACACACAAGAAGAGGAAGAAGAAGAAGAAgaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaggatgatgattctccctccttcttcgatgcccttctctgcgaAGAAGAGAAGAACATTCTCGATGATGATGACAACCACCAAAGCCTTCTCATGGACAATCATAATCATCATCATCACTTGTTATGGGAACACGACCACATCCTCTCTCTTCTCTCCAAAGAGACACACACTCACACCATTAATGCTTTTCTCGAGGCTCCACGAAACGACGCCGTCTCCTGGATTTGCAAAGTTAGCTGCTTCTATGGCTTCACTGCTTTGACCACTGTACTTGCAGTCAACTACTTCGACAGGTTCGTCACAAGCCTAACATTTCAGAGGGACAAGCCATGGATGACTCAGCTCACCGCTCTTGCGTGTTTATCTCTTGCTGCCAAAATGGAAGAGATCCATGTTCCACTTCTCTTGGACCTCCAAGTGGAGCAACCCAAGTTCTTGTTCGAAGCCAAGACTGTTCAGAGAATGGAGCTTCTTGTGTTGTCTACACTCCAATGGAGGATGAACCCTGTCACCCCAATTTCCTTCTTTGAACACATTGTTAGAAGGATTGGTTTGAAGACCCTTTTGCATTGGGAGTTCTTATGGAGGTGCCAGCGTGTTCTTCTTTCTGTCATTCCCAATTCAAGGTTCATGGGTTATCTCCCTTCTACATTGGCTGCTGCTACCATGATCCATGTTATTAAAGAGATTGAACCGTTAAATGCAATGGAATACATAAATCAACTCATGGGGTTACTCAAGACTAGTGAGGAACAAGTGAATGAGTGCTACAAACACATAGTGAAACAATTGGTTTTGAATCATGAAGGCATTTACAATCTTTGCCAAAAACGCAAACGGATATCCGAACCAAGTAGCCCCGGGGGTGTAATTGATGCATCATTCAGTTGTGACAGCTCAAATGATTCATGGACAGCAGCATCTTTGATCTCTCCTTCACTATCAATGGAGCCAATGTTTAAGAGGAGCAGAGCTCCGGACCAGCAGATGCGATTCGCCACAGTAAATCGAGTGTCTATCAATGTTATAGATAGTCCTCCTTAA 1377 0.4154 MHWGTAQRCDGLPTEDDEGMLEEPPLRGLCCSGTGMEARSYSDGLKRDFRETQKQKEKEKSSAMKQTTNNATNTNTLSALNMNMPHTQEEEEEEEEEEEEEEEEEEEEEEEDDDSPSFFDALLCEEEKNILDDDDNHQSLLMDNHNHHHHLLWEHDHILSLLSKETHTHTINAFLEAPRNDAVSWICKVSCFYGFTALTTVLAVNYFDRFVTSLTFQRDKPWMTQLTALACLSLAAKMEEIHVPLLLDLQVEQPKFLFEAKTVQRMELLVLSTLQWRMNPVTPISFFEHIVRRIGLKTLLHWEFLWRCQRVLLSVIPNSRFMGYLPSTLAAATMIHVIKEIEPLNAMEYINQLMGLLKTSEEQVNECYKHIVKQLVLNHEGIYNLCQKRKRISEPSSPGGVIDASFSCDSSNDSWTAASLISPSLSMEPMFKRSRAPDQQMRFATVNRVSINVIDSPP 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00605 458 MobiDBLite consensus disorder prediction 64 85 - -
Aip05g00605 458 MobiDBLite consensus disorder prediction 88 116 - -
Aip05g00605 458 MobiDBLite consensus disorder prediction 1 116 - -
Aip05g00605 458 Gene3D - 176 279 - -
Aip05g00605 458 Coils Coil 77 115 - -
Aip05g00605 458 MobiDBLite consensus disorder prediction 41 63 - -
Aip05g00605 458 Pfam Cyclin, N-terminal domain 177 279 IPR006671 -
Aip05g00605 458 SUPERFAMILY Cyclin-like 282 380 IPR036915 -
Aip05g00605 458 Gene3D - 280 371 - -
Aip05g00605 458 SUPERFAMILY Cyclin-like 145 279 IPR036915 -
Aip05g00605 458 SMART cyclin_7 184 272 IPR013763 -
Aip05g00605 458 SMART Cyclin_C_2 281 410 IPR004367 -
Aip05g00605 458 PANTHER CYCLINS 108 441 IPR039361 -
Aip05g00605 458 CDD CYCLIN 179 271 IPR013763 -
Aip05g00605 458 Pfam Cyclin, C-terminal domain 281 378 IPR004367 -
Aip05g00605 458 PANTHER CYCLIN-D3-2 108 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00605 Aip-Chr5 7432013 7437504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00605 105 448 Core Cell Cycle Gene Families AT5G67260 47.541 1.88e-101 307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00605 05 7432013 7437504 Aip01g01008 01 20627570 20629074 ECH
Aip07g03542 07 125459191 125469325 Aip05g00605 05 7432013 7437504 ECH
Aip06g03745 06 135099957 135103313 Aip05g00605 05 7432013 7437504 ECH
Aip05g00605 05 7432013 7437504 Aip05g00605 05 7432013 7437504 ECH
Aip05g00605 05 7432013 7437504 Aip09g03744 09 144269401 144271394 PCT
Aip01g01008 01 20627570 20629074 Aip05g00605 05 7432013 7437504 PCT