Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00399 ATGGCCGCTTCAATTCATCAACATGCTGCTACGGCCCCTATTTCTGCTTTCTTCATTCTATTCTTATTCCAATTCCTAACAGGTTCGTATTCAGCAACATTCACAATAGTAAACAAGTGCAGTTACACTGTTTGGCCAGGCATTTTATCCGGCGCCGGAACTGCTCCTCTCTCAACCACCGGCTTCGCCCTCCAGCCTGGAGAGTCCAACGCCATCGCCGTCCCCGCTGCCTGGTCCGGTCGTCTCTGGGGCCGCACCCTCTGCACTCAAAACACCACCACCGGAAAATTCACCTGCGTCACCGGCGACTGCGGCTCCTCCACCATGGAATGCTCCGGCGGCGGAGCGGCCCCTCCCGCCACCCTGGCGGAGTTCACACTGAACGGCGCCGGCGGGCTGGACTTCTTCGACGTGAGTCTCGTGGACGGGTACAATCTGCCGATGATAATCGAGCCTCAGGGCGGGAGCGGCGGCGGAAACTGCTCGGCGACGGGGTGCGTGGTGGACTTGAACAGTGCATGTCCGACGGAACTGAAGGTGATGAGTAGCAGTAGCGGCGGTGAGGAGAGCGTGGCGTGTAAAAGCGCGTGTGAAGCATTTGGGGATCCTGAATATTGTTGCAGCGGAGCATTCGGTAGCCCTGACACATGCAAGCCAAGCTCGTACTCGCAGTTCTTCAAGAGCGCGTGCCCACGCGCCTATAGCTACGCCTACGATGACGGCACAAGCACCTTCACATGTGCCTCTTCTGATTACCTTATCACTTTCTGTCCTTCCCCCTCCACTAGTTCGATCAAATCGGGGAATGGAAAATATCCCGTGGCGGTGCAAGTGTCGGGATCTCATCGTGTGGACAACAACGACGTCGTACTCAACATGATTATTGCCATCTCTGTCTTGGTTGGGTTTTGGCGTTTCTGGCAACTCAATTAG 933 0.5616 MAASIHQHAATAPISAFFILFLFQFLTGSYSATFTIVNKCSYTVWPGILSGAGTAPLSTTGFALQPGESNAIAVPAAWSGRLWGRTLCTQNTTTGKFTCVTGDCGSSTMECSGGGAAPPATLAEFTLNGAGGLDFFDVSLVDGYNLPMIIEPQGGSGGGNCSATGCVVDLNSACPTELKVMSSSSGGEESVACKSACEAFGDPEYCCSGAFGSPDTCKPSSYSQFFKSACPRAYSYAYDDGTSTFTCASSDYLITFCPSPSTSSIKSGNGKYPVAVQVSGSHRVDNNDVVLNMIIAISVLVGFWRFWQLN 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00399 310 Pfam Thaumatin family 38 258 IPR001938 -
Aip05g00399 310 CDD TLP-PA 33 257 - -
Aip05g00399 310 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 16 278 - -
Aip05g00399 310 SMART tha2 34 258 IPR001938 -
Aip05g00399 310 Gene3D Thaumatin 32 258 IPR037176 -
Aip05g00399 310 ProSiteProfiles Thaumatin family profile. 31 258 IPR001938 -
Aip05g00399 310 PIRSF PR5 1 299 IPR001938 -
Aip05g00399 310 PRINTS Pathogenesis-related protein signature 33 45 IPR001938 -
Aip05g00399 310 PRINTS Pathogenesis-related protein signature 81 92 IPR001938 -
Aip05g00399 310 PRINTS Pathogenesis-related protein signature 134 150 IPR001938 -
Aip05g00399 310 PRINTS Pathogenesis-related protein signature 248 257 IPR001938 -
Aip05g00399 310 PANTHER OS03G0233200 PROTEIN 16 278 IPR001938 -
Aip05g00399 310 SUPERFAMILY Osmotin, thaumatin-like protein 32 259 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00399 Aip-Chr5 4464212 4465472 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00399 05 4464212 4465472 Aip05g00399 05 4464212 4465472 ECH
Aip06g00045 06 379097 380588 Aip05g00399 05 4464212 4465472 ECH
Aip07g02411 07 101584730 101588056 Aip05g00399 05 4464212 4465472 ECH
Aip06g00046 06 386238 388835 Aip05g00399 05 4464212 4465472 ECH